SeqAn3  3.0.1
The Modern C++ library for sequence analysis.
scoring_scheme_concept.hpp
Go to the documentation of this file.
1 // -----------------------------------------------------------------------------------------------------
2 // Copyright (c) 2006-2020, Knut Reinert & Freie Universität Berlin
3 // Copyright (c) 2016-2020, Knut Reinert & MPI für molekulare Genetik
4 // This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5 // shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
6 // -----------------------------------------------------------------------------------------------------
7 
13 #pragma once
14 
16 
17 namespace seqan3
18 {
19 
57 
60 template <typename t, alphabet alphabet_t, alphabet alphabet2_t = alphabet_t>
61 SEQAN3_CONCEPT scoring_scheme = requires (t scheme,
62  alphabet_t const alph1,
63  alphabet2_t const alph2)
64 {
65  { scheme.score(alph1, alph2) };
66  requires std::common_reference_with<decltype(scheme.score(alph1, alph2)),
68 
69  { scheme.score(alphabet_t{}, alphabet2_t{}) };
70  requires std::common_reference_with<decltype(scheme.score(alphabet_t{}, alphabet2_t{})),
72 };
74 
75 } // namespace seqan3
scoring_scheme
A concept that requires that type be able to score two letters.
common_reference_with
The concept std::common_reference_with<T, U> specifies that two types T and U share a common referenc...
seqan3
The main SeqAn3 namespace.
Definition: aligned_sequence_concept.hpp:36
std::remove_reference_t
scoring_scheme::score
score_type score(alph1_t const alph1, alph2_t const alph2)
Compute the score of two letters.
concept.hpp
Core alphabet concept and free function/type trait wrappers.