SeqAn3  3.0.2
The Modern C++ library for sequence analysis.
align_config_method.hpp File Reference

Provides global and local alignment configurations. More...

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Classes

struct  seqan3::align_cfg::free_end_gaps_sequence1_leading
 A strong type representing free_end_gaps_sequence1_leading of the seqan3::align_cfg::method_global. More...
 
struct  seqan3::align_cfg::free_end_gaps_sequence1_trailing
 A strong type representing free_end_gaps_sequence1_trailing of the seqan3::align_cfg::method_global. More...
 
struct  seqan3::align_cfg::free_end_gaps_sequence2_leading
 A strong type representing free_end_gaps_sequence2_leading of the seqan3::align_cfg::method_global. More...
 
struct  seqan3::align_cfg::free_end_gaps_sequence2_trailing
 A strong type representing free_end_gaps_sequence2_trailing of the seqan3::align_cfg::method_global. More...
 
class  seqan3::align_cfg::method_global
 Sets the global alignment method. More...
 
class  seqan3::align_cfg::method_local
 Sets the local alignment method. More...
 

Namespaces

 seqan3
 The main SeqAn3 namespace.
 
 seqan3::align_cfg
 A special sub namespace for the alignment configurations.
 

Detailed Description

Provides global and local alignment configurations.

Author
Joshua Kim <joshua.kim AT fu-berlin.de>
Rene Rahn <rene.rahn AT fu-berlin.de>
Jörg Winkler <j.winkler AT fu-berlin.de>
Wiep van der Toorn <w.vandertoorn AT fu-berlin.de>