SeqAn3  3.0.2
The Modern C++ library for sequence analysis.

alignment → std Relation

File in seqan3/alignmentIncludes file in seqan3/std
aligned_sequence / aligned_sequence_concept.hppalgorithm
aligned_sequence / aligned_sequence_concept.hppranges
band / static_band.hppconcepts
configuration / align_config_result_type.hpptype_traits
configuration / align_config_scoring_scheme.hppconcepts
matrix / detail / aligned_sequence_builder.hppconcepts
matrix / detail / aligned_sequence_builder.hppranges
matrix / detail / alignment_matrix_column_major_range_base.hppiterator
matrix / detail / alignment_matrix_column_major_range_base.hppranges
matrix / detail / alignment_matrix_column_major_range_base.hppspan
matrix / detail / alignment_score_matrix_one_column.hppiterator
matrix / detail / alignment_score_matrix_one_column.hppranges
matrix / detail / alignment_score_matrix_one_column.hppspan
matrix / detail / alignment_score_matrix_one_column_banded.hppiterator
matrix / detail / alignment_score_matrix_one_column_banded.hppranges
matrix / detail / alignment_score_matrix_one_column_banded.hppspan
matrix / detail / alignment_trace_matrix_full.hppiterator
matrix / detail / alignment_trace_matrix_full.hppranges
matrix / detail / alignment_trace_matrix_full_banded.hppiterator
matrix / detail / alignment_trace_matrix_full_banded.hppranges
matrix / detail / alignment_trace_matrix_proxy.hppconcepts
matrix / detail / coordinate_matrix.hppconcepts
matrix / detail / coordinate_matrix.hppranges
matrix / detail / matrix_coordinate.hppconcepts
matrix / detail / score_matrix_single_column.hppranges
matrix / detail / trace_iterator_base.hppconcepts
matrix / detail / trace_iterator_base.hppranges
matrix / detail / trace_matrix_full.hppranges
matrix / detail / trace_matrix_full.hppspan
matrix / detail / two_dimensional_matrix.hppalgorithm
matrix / detail / two_dimensional_matrix.hppranges
matrix / detail / two_dimensional_matrix_iterator_base.hppconcepts
matrix / detail / two_dimensional_matrix_iterator_base.hppranges
matrix / detail / two_dimensional_matrix_iterator_concept.hppconcepts
matrix / detail / two_dimensional_matrix_iterator_concept.hppiterator
pairwise / detail / concept.hppranges
pairwise / detail / pairwise_alignment_algorithm.hppconcepts
pairwise / detail / pairwise_alignment_algorithm.hppranges
pairwise / detail / pairwise_alignment_algorithm_banded.hppconcepts
pairwise / detail / pairwise_alignment_algorithm_banded.hppranges
pairwise / detail / policy_optimum_tracker_simd.hppranges
pairwise / detail / type_traits.hppranges
scoring / detail / simd_match_mismatch_scoring_scheme.hppconcepts
scoring / detail / simd_matrix_scoring_scheme.hppconcepts
matrix / alignment_coordinate.hppconcepts
matrix / alignment_coordinate.hppiterator
matrix / alignment_optimum.hppconcepts
matrix / matrix_concept.hppconcepts
pairwise / align_result_selector.hppranges
pairwise / alignment_algorithm.hppiterator
pairwise / alignment_algorithm.hppranges
pairwise / edit_distance_fwd.hppconcepts
pairwise / edit_distance_fwd.hppranges
pairwise / edit_distance_unbanded.hppalgorithm
pairwise / edit_distance_unbanded.hppranges
scoring / aminoacid_scoring_scheme.hppalgorithm
scoring / gap_scheme.hppconcepts
scoring / scoring_scheme_base.hppalgorithm