Provides seqan3::alignment_file_output and corresponding traits classes. More...
#include <cassert>
#include <fstream>
#include <string>
#include <string_view>
#include <variant>
#include <vector>
#include <seqan3/core/concept/tuple.hpp>
#include <seqan3/core/type_list/traits.hpp>
#include <seqan3/io/alignment_file/format_bam.hpp>
#include <seqan3/io/alignment_file/format_sam.hpp>
#include <seqan3/io/alignment_file/header.hpp>
#include <seqan3/io/alignment_file/misc.hpp>
#include <seqan3/io/alignment_file/output_format_concept.hpp>
#include <seqan3/io/alignment_file/output_options.hpp>
#include <seqan3/io/detail/out_file_iterator.hpp>
#include <seqan3/io/detail/misc_output.hpp>
#include <seqan3/io/detail/record.hpp>
#include <seqan3/io/exception.hpp>
#include <seqan3/std/filesystem>
#include <seqan3/io/record.hpp>
#include <seqan3/io/stream/concept.hpp>
#include <seqan3/std/ranges>
Go to the source code of this file.
Classes | |
class | seqan3::alignment_file_output< selected_field_ids_, valid_formats_, ref_ids_type > |
A class for writing alignment files, e.g. SAM, BAL, BLAST, ... More... | |
Namespaces | |
seqan3 | |
The main SeqAn3 namespace. | |
Provides seqan3::alignment_file_output and corresponding traits classes.