Class
JoinConfigSpecifies the strategy and all necessary parameters used to journal a sequence to a reference sequence.
Specifies the strategy and all necessary parameters used to journal a sequence to a reference sequence.
All Subcl's | GlobalAlign, GlobalChain |
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Defined in | <seqan/journaled_set.h> |
Signature |
template <[typename TMethod]>
struct JoinConfig;
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Template Parameters
TMethod |
The method type. Types: GlobalAlign, GlobalChain |
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Detailed Description
SeqAn offers two general methods to compute the journal. The first one uses a globalAlignment function and the second one uses an anchor based approach.