Class
PigeonholeParametersParameters for the pigeonhole filter algorithm.
Parameters for the pigeonhole filter algorithm.
Defined in | <seqan/index/find_pigeonhole.h> |
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Signature |
struct PigeonholeParameters;
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Member Function Overview
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PigeonholeParameters::PigeonholeParameters();
Default constructor.
Member Variable Overview
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bool PigeonholeParameters::debug
Whether to print debug information, defaults to false. -
unsigned PigeonholeParameters::delta
Delta length, becomes index step site; defaults to 0. -
unsigned PigeonholeParameters::overlap
Overlap length of adjacent q-grams, default is to use non-overlappling q-grams (= 0). -
bool PigeonholeParameters::printDots
Whether to print dots for the scanning progress, defaults to false.
See Also
Member Functions Detail
PigeonholeParameters::PigeonholeParameters();
Default constructor.
Initializes all member variables, default values are given in the variable documentation.
Data Races
If not stated otherwise, concurrent invocation is not guaranteed to be thread-safe.
Member Variables Detail
bool PigeonholeParameters::debug
Whether to print debug information, defaults to false.
unsigned PigeonholeParameters::delta
Delta length, becomes index step site; defaults to 0.
A value of 0 means that the delta will be auto-detected.
unsigned PigeonholeParameters::overlap
Overlap length of adjacent q-grams, default is to use non-overlappling q-grams (= 0).
bool PigeonholeParameters::printDots
Whether to print dots for the scanning progress, defaults to false.