Enum FragmentStore::PredefinedAnnotationTypes
The FragmentStore predefines some commonly used typeId values.

Defined in <seqan/store.h>
Signature enum FragmentStore::PredefinedAnnotationTypes;

Enum Values

ANNO_ROOT
The root node ("<node>").
ANNO_GENE
A gene ("gene").
ANNO_MRNA
An mRNA sequence, aka transcript ("mRNA").
ANNO_CDS
A coding region ("CDS");
ANNO_EXON
An exon ("exon").
ANNO_FIVE_PRIME_UTR
A 5' untranslated region ("five_prime_UTR").
ANNO_INTRON
An intron ("intron").
ANNO_THREE_PRIME_UTR
A 3' untranslated region ("three_prime_UTR").

Detailed Description

These types can be used to compare or set the typeId directly as a fast alternative to getType and setType.