Typedef Blosum30BLOSUM30 scoring matrix.
BLOSUM30 scoring matrix.
Defined in | <seqan/score.h> |
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Signature |
typedef Score<int, ScoreMatrix<AminoAcid, ScoreSpecBlosum30> > Blosum30;
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Overview
A 4 B 0 5 C -3 -2 17 D 0 5 -3 9 E 0 0 1 1 6 F -2 -3 -3 -5 -4 10 G 0 0 -4 -1 -2 -3 8 H -2 -2 -5 -2 0 -3 -3 14 I 0 -2 -2 -4 -3 0 -1 -2 6 J -1 -2 -1 -3 -2 1 -2 -2 4 4 K 0 0 -3 0 2 -1 -1 -2 -2 -2 4 L -1 -1 0 -1 -1 2 -2 -1 2 3 -2 4 M 1 -2 -2 -3 -1 -2 -2 2 1 2 2 2 6 N 0 4 -1 1 -1 -1 0 -1 0 -1 0 -2 0 8 X 0 -1 -2 -1 -1 -1 -1 -1 0 0 0 0 0 0 -1 P -1 -2 -3 -1 1 -4 -1 1 -3 -3 1 -3 -4 -3 -1 11 Q 1 -1 -2 -1 2 -3 -2 0 -2 -2 0 -2 -1 -1 0 0 8 R -1 -2 -2 -1 -1 -1 -2 -1 -3 -3 1 -2 0 -2 -1 -1 3 8 S 1 0 -2 0 0 -1 0 -1 -1 -2 0 -2 -2 0 0 -1 -1 -1 4 T 1 0 -2 -1 -2 -2 -2 -2 0 0 -1 0 0 1 0 0 0 -3 2 5 U 0 -1 -2 -1 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 0 -1 0 0 -1 V 1 -2 -2 -2 -3 1 -3 -3 4 3 -2 1 0 -2 0 -4 -3 -1 -1 1 0 5 W -5 -5 -2 -4 -1 1 1 -5 -3 -3 -2 -2 -3 -7 -2 -3 -1 0 -3 -5 -2 -3 20 Y -4 -3 -6 -1 -2 3 -3 0 -1 1 -1 3 -1 -4 -1 -2 -1 0 -2 -1 -1 1 5 9 Z 0 0 0 0 5 -4 -2 0 -3 -2 1 -1 -1 -1 0 0 4 0 -1 -1 0 -3 -1 -2 4 X 0 -1 -2 -1 -1 -1 -1 -1 0 0 0 0 0 0 -1 -1 0 -1 0 0 -1 0 -2 -1 0 -1 * -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 -7 1 A B C D E F G H I J K L M N O P Q R S T U V W Y Z X *