Spec
GenericShapeA variable gapped shape.
A variable gapped shape.
Extends | Shape |
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All Extended | Shape |
Defined in | <seqan/index.h> |
Signature |
template <typename TValue>
class Shape<TValue, GenericShape>;
|
Member Function Overview
Interface Function Overview
Interface Functions Inherited From Shape
Interface Metafunction Overview
Interface Metafunctions Inherited From Shape
Detailed Description
A GenericShape must be initialized first with a valid shape. To do so, call stringToShape.
See Also
Member Functions Detail
Shape::Shape();
Shape::Shape(q);
Shape::Shape(shape);
Shape::Shape(bitmap);
Shape::Shape(predefined);
Constructor
Parameters
predefined
|
Any instance of a predefined shape spec (e.g. ShapePatternHunter). |
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q
|
Creates an ungapped q-gram. |
shape
|
Any other gapped/ungapped shape. |
bitmap
|
Bitmap string. Sequence of '0's and '1's. See stringToShape |
Data Races
If not stated otherwise, concurrent invocation is not guaranteed to be thread-safe.