1. SpecSpec

    1. Spec AbndmAlgoPattern

  2. ClassClass

    1. Class Accumulator

  3. SpecSpec

    1. Spec AdaptorIterator

  4. fn()fn()

    1. fn() addToProfile

  5. SpecSpec

    1. Spec AdjacencyIterator

  6. ClassClass

    1. Class AFScore

  7. ConceptConcept

    1. Concept AggregateConcept

  8. GroupGroup

    1. Group AggregateTags

  9. SpecSpec

    1. Spec AhoCorasickPattern

  10. ClassClass

    1. Class Align

  11. SpecSpec

    1. Spec AlignColIterator

  12. ClassClass

    1. Class AlignCols

  13. ClassClass

    1. Class AlignConfig

  14. ClassClass

    1. Class AlignedReadLayout

  15. ClassClass

    1. Class AlignedReadStoreElement

  16. GroupGroup

    1. Group AlignmentAlgorithmTags

  17. fn()fn()

    1. fn() alignmentEvaluation

  18. fn()fn()

    1. fn() alignmentFreeComparison

  19. SpecSpec

    1. Spec AlignmentGraph

  20. GroupGroup

    1. Group AlignmentGraphCombinationTags

  21. GroupGroup

    1. Group AlignmentGraphFormatTags

  22. ClassClass

    1. Class AlignmentStats

  23. ClassClass

    1. Class AlignQualityStoreElement

  24. ClassClass

    1. Class AlignTraceback

  25. ClassClass

    1. Class Allocator

  26. GroupGroup

    1. Group AllocatorUsageTags

  27. SpecSpec

    1. Spec AllocString

  28. Fn<>Fn<>

    1. Fn<> AllowsFastRandomAccess

  29. fn()fn()

    1. fn() allPairsShortestPath

  30. ConceptConcept

    1. Concept AlphabetConcept

  31. ClassClass

    1. Class AlphabetExpansion

  32. ConceptConcept

    1. Concept AlphabetWithGapsConcept

  33. ConceptConcept

    1. Concept AlphabetWithQualitiesConcept

  34. ConceptConcept

    1. Concept AlphabetWithUnknownValueConcept

  35. SpecSpec

    1. Spec AminoAcid

  36. enumenum

    1. enum AminoAcidScoreMatrixID

  37. SpecSpec

    1. Spec AnchorGaps

  38. ClassClass

    1. Class AnnotationStoreElement

  39. SpecSpec

    1. Spec AnnotationTreeIterator

  40. GroupGroup

    1. Group ApproximateFinderSearchTypeTags

  41. ClassClass

    1. Class ArgParseArgument

  42. enumenum

    1. enum ArgParseArgument::ArgumentType

  43. SpecSpec

    1. Spec ArgParseOption

  44. ClassClass

    1. Class ArgumentParser

  45. enumenum

    1. enum ArgumentParser::ParseResult

  46. fn()fn()

    1. fn() arrayClearSpace

  47. fn()fn()

    1. fn() arrayConstruct

  48. fn()fn()

    1. fn() arrayConstructCopy

  49. fn()fn()

    1. fn() arrayConstructMove

  50. fn()fn()

    1. fn() arrayCopy

  51. fn()fn()

    1. fn() arrayCopyBackward

  52. fn()fn()

    1. fn() arrayCopyForward

  53. fn()fn()

    1. fn() arrayDestruct

  54. fn()fn()

    1. fn() arrayFill

  55. SpecSpec

    1. Spec ArrayGaps

  56. fn()fn()

    1. fn() arrayMove

  57. fn()fn()

    1. fn() arrayMoveBackward

  58. fn()fn()

    1. fn() arrayMoveForward

  59. SpecSpec

    1. Spec ArrayString

  60. GroupGroup

    1. Group AssertMacros

  61. ConceptConcept

    1. Concept AssignableConcept

  62. fn()fn()

    1. fn() assignQualities

  63. fn()fn()

    1. fn() assignTagsBamToSam

  64. fn()fn()

    1. fn() assignTagsSamToBam

  65. SpecSpec

    1. Spec AsyncFile

  66. ClassClass

    1. Class AsyncRequest

  67. fn()fn()

    1. fn() atomicMax

  68. fn()fn()

    1. fn() atomicMin

  69. GroupGroup

    1. Group AtomicPrimitives

  70. SpecSpec

    1. Spec Automaton

  71. SpecSpec

    1. Spec AutoSeqFormat

  72. SpecSpec

    1. Spec AverageAccumulator

  73. ClassClass

    1. Class BadAlloc

  74. ClassClass

    1. Class BadCast

  75. SpecSpec

    1. Spec BadLexicalCast

  76. SpecSpec

    1. Spec BaiBamIndex

  77. varvar

    1. var BAM_FLAG_SUPPLEMENTARY = 0x0800

  78. ClassClass

    1. Class BamAlignmentRecord

  79. SpecSpec

    1. Spec BamFileIn

  80. SpecSpec

    1. Spec BamFileOut

  81. enumenum

    1. enum BamFlags

  82. ClassClass

    1. Class BamHeader

  83. ClassClass

    1. Class BamHeaderRecord

  84. enumenum

    1. enum BamHeaderRecordType

  85. ClassClass

    1. Class BamIndex

  86. ClassClass

    1. Class BamIOContext

  87. GroupGroup

    1. Group BamIOContextMemberTag

  88. enumenum

    1. enum BamSortOrder

  89. ClassClass

    1. Class BamTagsDict

  90. fn()fn()

    1. fn() bandedChainAlignment

  91. SpecSpec

    1. Spec BandedLocalAlignmentEnumerator

  92. Fn<>Fn<>

    1. Fn<> BasicStream

  93. SpecSpec

    1. Spec Bed12Record

  94. SpecSpec

    1. Spec Bed3Record

  95. SpecSpec

    1. Spec Bed4Record

  96. SpecSpec

    1. Spec Bed5Record

  97. SpecSpec

    1. Spec Bed6Record

  98. SpecSpec

    1. Spec BedFileIn

  99. SpecSpec

    1. Spec BedFileOut

  100. ClassClass

    1. Class BedRecord

  101. ClassClass

    1. Class BedRgb

  102. fn()fn()

    1. fn() bellmanFordAlgorithm

  103. ClassClass

    1. Class BetaDistribution

  104. SpecSpec

    1. Spec BfamPattern

  105. SpecSpec

    1. Spec BfsIterator

  106. ClassClass

    1. Class BidirectionalIndex

  107. ConceptConcept

    1. Concept BidirectionalIteratorConcept

  108. ConceptConcept

    1. Concept BidirectionalStreamConcept

  109. SpecSpec

    1. Spec BitPackedPair

  110. SpecSpec

    1. Spec BitPackedTuple

  111. fn()fn()

    1. fn() bitScanForward

  112. fn()fn()

    1. fn() bitScanReverse

  113. ClassClass

    1. Class BlastIOContext

  114. ClassClass

    1. Class BlastMatch

  115. ClassClass

    1. Class BlastMatchField

  116. enumenum

    1. enum BlastMatchField::Enum

  117. enumenum

    1. enum BlastProgram

  118. ClassClass

    1. Class BlastProgramSelector

  119. ClassClass

    1. Class BlastRecord

  120. ClassClass

    1. Class BlastReport

  121. SpecSpec

    1. Spec BlastReportFileOut

  122. ClassClass

    1. Class BlastScoringScheme

  123. ClassClass

    1. Class BlastTabular

  124. SpecSpec

    1. Spec BlastTabularFileIn

  125. SpecSpec

    1. Spec BlastTabularFileOut

  126. ClassClass

    1. Class BlastTabularLL

  127. enumenum

    1. enum BlastTabularSpec

  128. ClassClass

    1. Class BlastTabularSpecSelector

  129. SpecSpec

    1. Spec BlockString

  130. typedeftypedef

    1. typedef Blosum30

  131. typedeftypedef

    1. typedef Blosum45

  132. typedeftypedef

    1. typedef Blosum62

  133. typedeftypedef

    1. typedef Blosum80

  134. SpecSpec

    1. Spec BndmAlgoPattern

  135. GroupGroup

    1. Group BottomUp

  136. SpecSpec

    1. Spec BottomUpIterator

  137. fn()fn()

    1. fn() breadthFirstSearch

  138. ClassClass

    1. Class BufferedStream

  139. fn()fn()

    1. fn() buildAlignmentGraph

  140. fn()fn()

    1. fn() bundle2

  141. ClassClass

    1. Class Bundle2

  142. fn()fn()

    1. fn() bundle3

  143. ClassClass

    1. Class Bundle3

  144. fn()fn()

    1. fn() bundle5

  145. ClassClass

    1. Class Bundle5

  146. Fn<>Fn<>

    1. Fn<> BytesPerValue

  147. fn()fn()

    1. fn() calcBetaDistParam

  148. fn()fn()

    1. fn() calcLogNormalDistParam

  149. fn()fn()

    1. fn() calculateCovariance

  150. fn()fn()

    1. fn() calculateOverlapIndicator

  151. fn()fn()

    1. fn() calculatePeriodicity

  152. fn()fn()

    1. fn() calculateProbability

  153. fn()fn()

    1. fn() calculateVariance

  154. Fn<>Fn<>

    1. Fn<> Cargo

  155. SpecSpec

    1. Spec Caster

  156. SpecSpec

    1. Spec ChainedSeed

  157. fn()fn()

    1. fn() chainSeedsGlobally

  158. typedeftypedef

    1. typedef CharIterator

  159. typedeftypedef

    1. typedef CharString

  160. Fn<>Fn<>

    1. Fn<> Chunk

  161. ClassClass

    1. Class CigarElement

  162. fn()fn()

    1. fn() clearAllBits

  163. fn()fn()

    1. fn() clearBit

  164. ConceptConcept

    1. Concept ComparableConcept

  165. Fn<>Fn<>

    1. Fn<> Comparator

  166. Fn<>Fn<>

    1. Fn<> CompareType

  167. Fn<>Fn<>

    1. Fn<> CompareTypeImpl

  168. fn()fn()

    1. fn() complement

  169. ClassClass

    1. Class CompressedSA

  170. GroupGroup

    1. Group CompressedSAFibres

  171. fn()fn()

    1. fn() computeAlignmentStats

  172. fn()fn()

    1. fn() computeSplitters

  173. SpecSpec

    1. Spec ConcatDirectStringSet

  174. ClassClass

    1. Class ConcatenatorManyToOne

  175. SpecSpec

    1. Spec ConcatVirtualIterator

  176. GroupGroup

    1. Group ConceptChecking

  177. ClassClass

    1. Class ConcurrentQueue

  178. SpecSpec

    1. Spec ConcurrentSuspendableQueue

  179. fn()fn()

    1. fn() connectedComponents

  180. ClassClass

    1. Class ConsensusAlignerIllegalArgumentException

  181. fn()fn()

    1. fn() consensusAlignment

  182. ClassClass

    1. Class ConsensusAlignmentOptions

  183. ClassClass

    1. Class ConsensusScoreSequenceEntry

  184. ConceptConcept

    1. Concept ContainerConcept

  185. GroupGroup

    1. Group ContainerIteratorTags

  186. ClassClass

    1. Class ContainerView

  187. ClassClass

    1. Class ContigFile

  188. ClassClass

    1. Class ContigStoreElement

  189. fn()fn()

    1. fn() convert

  190. Fn<>Fn<>

    1. Fn<> Convert

  191. ConceptConcept

    1. Concept ConvertibleConcept

  192. fn()fn()

    1. fn() convertImpl

  193. fn()fn()

    1. fn() convertQuality

  194. ConceptConcept

    1. Concept CopyConstructibleConcept

  195. SpecSpec

    1. Spec Counter

  196. SpecSpec

    1. Spec CountingIdManager

  197. fn()fn()

    1. fn() countKmers

  198. fn()fn()

    1. fn() cpuTime

  199. fn()fn()

    1. fn() createBWTable

  200. fn()fn()

    1. fn() createInvSuffixArray

  201. fn()fn()

    1. fn() createLcpTable

  202. fn()fn()

    1. fn() createSuffixArray

  203. SpecSpec

    1. Spec CStyleString

  204. fn()fn()

    1. fn() cutNs

  205. ClassClass

    1. Class CyclicShape

  206. SpecSpec

    1. Spec D2AFScore

  207. SpecSpec

    1. Spec D2StarAFScore

  208. SpecSpec

    1. Spec D2zAFScore

  209. fn()fn()

    1. fn() dagShortestPath

  210. Fn<>Fn<>

    1. Fn<> DeepestSpec

  211. TagTag

    1. Tag Default

  212. ConceptConcept

    1. Concept DefaultConstructibleConcept

  213. Fn<>Fn<>

    1. Fn<> DefaultFindBeginPatternSpec

  214. Fn<>Fn<>

    1. Fn<> DefaultFinder

  215. ClassClass

    1. Class DefaultJstConfig

  216. Fn<>Fn<>

    1. Fn<> DefaultOverflowExplicit

  217. Fn<>Fn<>

    1. Fn<> DefaultOverflowImplicit

  218. Fn<>Fn<>

    1. Fn<> DefaultPattern

  219. Fn<>Fn<>

    1. Fn<> DefaultPrefixOrder

  220. fn()fn()

    1. fn() defaultRng

  221. ClassClass

    1. Class DefaultSeedConfig

  222. ClassClass

    1. Class DeltaMap

  223. SpecSpec

    1. Spec DeltaMapIterator

  224. enumenum

    1. enum DeltaType

  225. GroupGroup

    1. Group DeltaTypeTags

  226. SpecSpec

    1. Spec DependentStringSet

  227. fn()fn()

    1. fn() depthFirstSearch

  228. ClassClass

    1. Class Deque

  229. ConceptConcept

    1. Concept DestructibleConcept

  230. Fn<>Fn<>

    1. Fn<> Device

  231. GroupGroup

    1. Group DfiIndexFibres

  232. GroupGroup

    1. Group DfsOrder

  233. SpecSpec

    1. Spec DfsPreorderIterator

  234. Fn<>Fn<>

    1. Fn<> Difference

  235. fn()fn()

    1. fn() dijkstra

  236. SpecSpec

    1. Spec DirectedGraph

  237. GroupGroup

    1. Group DirectionTags

  238. GroupGroup

    1. Group DistanceCalculationTags

  239. SpecSpec

    1. Spec Dna

  240. SpecSpec

    1. Spec Dna5

  241. typedeftypedef

    1. typedef Dna5Iterator

  242. SpecSpec

    1. Spec Dna5Q

  243. typedeftypedef

    1. typedef Dna5QString

  244. typedeftypedef

    1. typedef Dna5String

  245. typedeftypedef

    1. typedef Dna5StringComplement

  246. typedeftypedef

    1. typedef Dna5StringReverse

  247. typedeftypedef

    1. typedef Dna5StringReverseComplement

  248. typedeftypedef

    1. typedef DnaIterator

  249. SpecSpec

    1. Spec DnaQ

  250. typedeftypedef

    1. typedef DnaQString

  251. typedeftypedef

    1. typedef DnaString

  252. typedeftypedef

    1. typedef DnaStringComplement

  253. typedeftypedef

    1. typedef DnaStringReverse

  254. typedeftypedef

    1. typedef DnaStringReverseComplement

  255. TagTag

    1. Tag DotDrawing

  256. typedeftypedef

    1. typedef DPBand

  257. ClassClass

    1. Class DPBandConfig

  258. GroupGroup

    1. Group DPBandSwitch

  259. SpecSpec

    1. Spec DPSearchPattern

  260. SpecSpec

    1. Spec Echoer

  261. SpecSpec

    1. Spec EdgeIterator

  262. ClassClass

    1. Class EdgeStump

  263. TagTag

    1. Tag EditDistance

  264. SpecSpec

    1. Spec EditDistanceScore

  265. typedeftypedef

    1. typedef EditDistanceScoreTypedef

  266. SpecSpec

    1. Spec EditEnvironment

  267. SpecSpec

    1. Spec EmptyFieldError

  268. GroupGroup

    1. Group EnableIfFunctionality

  269. fn()fn()

    1. fn() endsWith

  270. ConceptConcept

    1. Concept EqualityComparableConcept

  271. SpecSpec

    1. Spec Equidistant

  272. SpecSpec

    1. Spec ExactFragment

  273. SpecSpec

    1. Spec ExactReversableFragment

  274. ClassClass

    1. Class Exception

  275. GroupGroup

    1. Group ExceptionHandling

  276. fn()fn()

    1. fn() expectation

  277. fn()fn()

    1. fn() extendAlignment

  278. enumenum

    1. enum ExtensionDirection

  279. ClassClass

    1. Class ExternalConfig

  280. ClassClass

    1. Class ExternalConfigLarge

  281. ClassClass

    1. Class ExternalConfigSize

  282. SpecSpec

    1. Spec ExternalString

  283. ClassClass

    1. Class FaiIndex

  284. Fn<>Fn<>

    1. Fn<> Fibre

  285. ClassClass

    1. Class File

  286. GroupGroup

    1. Group FileCompressionTags

  287. Fn<>Fn<>

    1. Fn<> FileExtensions

  288. GroupGroup

    1. Group FileFormats

  289. ClassClass

    1. Class FileMapping

  290. enumenum

    1. enum FileMappingAdvise

  291. enumenum

    1. enum FileMappingMode

  292. enumenum

    1. enum FileOpenMode

  293. SpecSpec

    1. Spec Filter

  294. Fn<>Fn<>

    1. Fn<> Find

  295. ClassClass

    1. Class Finder

  296. fn()fn()

    1. fn() findRepeats

  297. SpecSpec

    1. Spec Finite

  298. ConceptConcept

    1. Concept FiniteOrderedAlphabetConcept

  299. SpecSpec

    1. Spec FixedCyclicShape

  300. fn()fn()

    1. fn() floydWarshallAlgorithm

  301. SpecSpec

    1. Spec FMIndex

  302. GroupGroup

    1. Group FMIndexCompressionSpec

  303. ClassClass

    1. Class FMIndexConfig

  304. GroupGroup

    1. Group FMIndexFibres

  305. GroupGroup

    1. Group FMIndexRankDictionarySpec

  306. fn()fn()

    1. fn() fordFulkersonAlgorithm

  307. ClassClass

    1. Class FormattedFile

  308. ConceptConcept

    1. Concept FormattedFileHeaderConcept

  309. SpecSpec

    1. Spec FormattedFileIn

  310. SpecSpec

    1. Spec FormattedFileOut

  311. ConceptConcept

    1. Concept FormattedFileRecordConcept

  312. ClassClass

    1. Class FormattedNumber

  313. ConceptConcept

    1. Concept ForwardContainerConcept

  314. ConceptConcept

    1. Concept ForwardIteratorConcept

  315. ClassClass

    1. Class Fragment

  316. ClassClass

    1. Class FragmentStore

  317. enumenum

    1. enum FragmentStore::PredefinedAnnotationTypes

  318. ClassClass

    1. Class FunctorComplement

  319. ClassClass

    1. Class FunctorConvert

  320. ClassClass

    1. Class FunctorLowcase

  321. ClassClass

    1. Class FunctorUpcase

  322. ClassClass

    1. Class GapAnchor

  323. GroupGroup

    1. Group GapDirectionTags

  324. SpecSpec

    1. Spec GappedShape

  325. Fn<>Fn<>

    1. Fn<> GappedValueType

  326. ClassClass

    1. Class Gaps

  327. ClassClass

    1. Class GapsIterator

  328. GroupGroup

    1. Group GapsSpecTag

  329. SpecSpec

    1. Spec GenericCyclicShape

  330. SpecSpec

    1. Spec GenericShape

  331. SpecSpec

    1. Spec GenerousDependentStringSet

  332. TagTag

    1. Tag GeneticCode

  333. enumenum

    1. enum GeneticCodeSpec

  334. ClassClass

    1. Class GenomicRegion

  335. fn()fn()

    1. fn() getAbsolutePath

  336. fn()fn()

    1. fn() getBamTypeChar

  337. fn()fn()

    1. fn() getBamTypeSize

  338. Fn<>Fn<>

    1. Fn<> GetDefaultRng

  339. fn()fn()

    1. fn() getTerminalSize

  340. Fn<>Fn<>

    1. Fn<> GetValue

  341. SpecSpec

    1. Spec GffFileIn

  342. SpecSpec

    1. Spec GffFileOut

  343. ClassClass

    1. Class GffRecord

  344. SpecSpec

    1. Spec GlobalAlign

  345. fn()fn()

    1. fn() globalAlignment

  346. fn()fn()

    1. fn() globalAlignmentScore

  347. SpecSpec

    1. Spec GlobalChain

  348. GroupGroup

    1. Group GlobalChainingTags

  349. fn()fn()

    1. fn() globalMsaAlignment

  350. ClassClass

    1. Class Graph

  351. GroupGroup

    1. Group GraphIteratorTags

  352. ConceptConcept

    1. Concept GraphOverAlphabetConcept

  353. fn()fn()

    1. fn() guessFormatFromFilename

  354. TagTag

    1. Tag HammingDistance

  355. SpecSpec

    1. Spec HammingSimplePattern

  356. SpecSpec

    1. Spec HammingStringEnumerator

  357. SpecSpec

    1. Spec HardwiredShape

  358. Fn<>Fn<>

    1. Fn<> HasMoveConstructor

  359. fn()fn()

    1. fn() heaviestIncreasingSubsequence

  360. SpecSpec

    1. Spec HierarchicalPexPattern

  361. GroupGroup

    1. Group HmmAlgorithms

  362. SpecSpec

    1. Spec HmmGraph

  363. ClassClass

    1. Class Holder

  364. SpecSpec

    1. Spec HorspoolPattern

  365. ConceptConcept

    1. Concept HostedConcept

  366. Fn<>Fn<>

    1. Fn<> Id

  367. ClassClass

    1. Class IdManager

  368. fn()fn()

    1. fn() ignoreUnusedVariableWarning

  369. ClassClass

    1. Class Index

  370. SpecSpec

    1. Spec IndexDfi

  371. SpecSpec

    1. Spec IndexEsa

  372. GroupGroup

    1. Group IndexEsaFibres

  373. GroupGroup

    1. Group IndexFindAlgorithm

  374. SpecSpec

    1. Spec IndexQGram

  375. SpecSpec

    1. Spec IndexSa

  376. SpecSpec

    1. Spec IndexWotd

  377. SpecSpec

    1. Spec InfixSegment

  378. ConceptConcept

    1. Concept InputIteratorConcept

  379. ConceptConcept

    1. Concept InputStreamConcept

  380. SpecSpec

    1. Spec InputStreamIterator

  381. ConceptConcept

    1. Concept IntegerConcept

  382. Fn<>Fn<>

    1. Fn<> IntegralForValue

  383. fn()fn()

    1. fn() integrateAlign

  384. ClassClass

    1. Class InternalPointerPropertyMap

  385. ClassClass

    1. Class InternalPropertyMap

  386. ClassClass

    1. Class IntervalAndCargo

  387. ClassClass

    1. Class IntervalTree

  388. ClassClass

    1. Class IntervalTreeNode

  389. GroupGroup

    1. Group IntervalTreeNodeTypeTags

  390. ClassClass

    1. Class IOError

  391. Fn<>Fn<>

    1. Fn<> IosOpenMode

  392. Fn<>Fn<>

    1. Fn<> Is

  393. fn()fn()

    1. fn() isAnsiColorTerminal

  394. fn()fn()

    1. fn() isBitSet

  395. Fn<>Fn<>

    1. Fn<> IsCharType

  396. Fn<>Fn<>

    1. Fn<> IsContiguous

  397. Fn<>Fn<>

    1. Fn<> IsDevice

  398. Fn<>Fn<>

    1. Fn<> IsInteger

  399. Fn<>Fn<>

    1. Fn<> IsIntegral

  400. Fn<>Fn<>

    1. Fn<> IsLightWeight

  401. Fn<>Fn<>

    1. Fn<> IsSameType

  402. Fn<>Fn<>

    1. Fn<> IsSequence

  403. Fn<>Fn<>

    1. Fn<> IsSimple

  404. fn()fn()

    1. fn() isTerminal

  405. Fn<>Fn<>

    1. Fn<> IsView

  406. ClassClass

    1. Class Iter

  407. ConceptConcept

    1. Concept IteratorAssociatedTypesConcept

  408. SpecSpec

    1. Spec IteratorProxy

  409. SpecSpec

    1. Spec Iupac

  410. typedeftypedef

    1. typedef IupacIterator

  411. typedeftypedef

    1. typedef IupacString

  412. ClassClass

    1. Class JoinConfig

  413. SpecSpec

    1. Spec Joiner

  414. GroupGroup

    1. Group JoinStrategiesTags

  415. SpecSpec

    1. Spec JournaledSet

  416. SpecSpec

    1. Spec JournaledString

  417. ClassClass

    1. Class JournaledStringTree

  418. Fn<>Fn<>

    1. Fn<> Key

  419. fn()fn()

    1. fn() kruskalsAlgorithm

  420. Fn<>Fn<>

    1. Fn<> LENGTH

  421. ConceptConcept

    1. Concept LessThanComparableConcept

  422. TagTag

    1. Tag LevenshteinDistance

  423. SpecSpec

    1. Spec LevenshteinStringEnumerator

  424. ClassClass

    1. Class Lexical

  425. fn()fn()

    1. fn() lexicalCast

  426. fn()fn()

    1. fn() lexicalCastWithException

  427. ClassClass

    1. Class LF

  428. GroupGroup

    1. Group LFTableFibres

  429. ClassClass

    1. Class LibraryStoreElement

  430. varvar

    1. var LibraryStoreElementstd

  431. fn()fn()

    1. fn() localAlignment

  432. ClassClass

    1. Class LocalAlignmentEnumerator

  433. GroupGroup

    1. Group LocalChainingTags

  434. ClassClass

    1. Class LocalMatch

  435. ClassClass

    1. Class LocalMatchStore

  436. ClassClass

    1. Class LocalMatchStoreConfig

  437. fn()fn()

    1. fn() log2

  438. GroupGroup

    1. Group LogicalValuesTags

  439. GroupGroup

    1. Group LogicMetaprogramming

  440. ClassClass

    1. Class LogProb

  441. fn()fn()

    1. fn() longestCommonSubsequence

  442. fn()fn()

    1. fn() longestIncreasingSubsequence

  443. ClassClass

    1. Class Loop

  444. ClassClass

    1. Class LoopReverse

  445. fn()fn()

    1. fn() lowerBoundAlignedReads

  446. Fn<>Fn<>

    1. Fn<> MagicHeader

  447. Fn<>Fn<>

    1. Fn<> MakePacked

  448. Fn<>Fn<>

    1. Fn<> MakeSigned

  449. Fn<>Fn<>

    1. Fn<> MakeUnsigned

  450. fn()fn()

    1. fn() makeZipIterator

  451. fn()fn()

    1. fn() makeZipView

  452. ClassClass

    1. Class Map

  453. SpecSpec

    1. Spec MapperConfig

  454. SpecSpec

    1. Spec MapperConfigSize

  455. SpecSpec

    1. Spec MapperSpec

  456. ClassClass

    1. Class MarkovModel

  457. fn()fn()

    1. fn() matchRefinement

  458. ClassClass

    1. Class MatePairStoreElement

  459. ClassClass

    1. Class Matrix

  460. SpecSpec

    1. Spec MatrixScore

  461. SpecSpec

    1. Spec MaxRepeatsIterator

  462. Fn<>Fn<>

    1. Fn<> Member

  463. fn()fn()

    1. fn() memset

  464. GroupGroup

    1. Group MetafunctionSwitch

  465. GroupGroup

    1. Group MetaprogrammingMath

  466. ClassClass

    1. Class MMapConfig

  467. SpecSpec

    1. Spec MMapString

  468. SpecSpec

    1. Spec ModCyclicShapeModifiedIterator

  469. SpecSpec

    1. Spec ModCyclicShapeModifiedString

  470. ClassClass

    1. Class ModifiedAlphabet

  471. ClassClass

    1. Class ModifiedIterator

  472. ClassClass

    1. Class ModifiedString

  473. SpecSpec

    1. Spec ModReverseIterator

  474. SpecSpec

    1. Spec ModReverseString

  475. SpecSpec

    1. Spec ModViewModifiedIterator

  476. SpecSpec

    1. Spec ModViewModifiedString

  477. TagTag

    1. Tag Move

  478. ClassClass

    1. Class MsaOptions

  479. SpecSpec

    1. Spec MultiBfamPattern

  480. SpecSpec

    1. Spec MultiMemsIterator

  481. GroupGroup

    1. Group MultipleSequenceAlignmentTags

  482. SpecSpec

    1. Spec MultipleShiftAndPattern

  483. SpecSpec

    1. Spec MultiPoolAllocator

  484. SpecSpec

    1. Spec MumsIterator

  485. TagTag

    1. Tag Murphy10

  486. ConceptConcept

    1. Concept MutableBidirectionalIteratorConcept

  487. ConceptConcept

    1. Concept MutableForwardIteratorConcept

  488. ConceptConcept

    1. Concept MutableRandomAccessIteratorConcept

  489. ConceptConcept

    1. Concept MutableRootedIteratorConcept

  490. ConceptConcept

    1. Concept MutableRootedRandomAccessIteratorConcept

  491. SpecSpec

    1. Spec MyersPattern

  492. typedeftypedef

    1. typedef MyersUkkonen

  493. typedeftypedef

    1. typedef MyersUkkonenBanded

  494. typedeftypedef

    1. typedef MyersUkkonenGlobal

  495. typedeftypedef

    1. typedef MyersUkkonenGlobalBanded

  496. SpecSpec

    1. Spec N2AFScore

  497. SpecSpec

    1. Spec Namer

  498. ClassClass

    1. Class NameStoreCache

  499. fn()fn()

    1. fn() njTree

  500. SpecSpec

    1. Spec NonHierarchicalPexPattern

  501. TagTag

    1. Tag Nothing

  502. ConceptConcept

    1. Concept NumberConcept

  503. SpecSpec

    1. Spec OneGappedShape

  504. SpecSpec

    1. Spec OpenAddressingQGramIndex

  505. GroupGroup

    1. Group OpenAdressingTags

  506. SpecSpec

    1. Spec OracleBfamPattern

  507. SpecSpec

    1. Spec OracleMultiBfamPattern

  508. ConceptConcept

    1. Concept OrderedAlphabetConcept

  509. fn()fn()

    1. fn() orderOccurrences

  510. SpecSpec

    1. Spec OutEdgeIterator

  511. ConceptConcept

    1. Concept OutputIteratorConcept

  512. ConceptConcept

    1. Concept OutputStreamConcept

  513. SpecSpec

    1. Spec OutputStreamIterator

  514. GroupGroup

    1. Group OverflowStrategyTags

  515. SpecSpec

    1. Spec OwnerStringSet

  516. SpecSpec

    1. Spec PackedPair

  517. SpecSpec

    1. Spec PackedString

  518. SpecSpec

    1. Spec PackedTriple

  519. ClassClass

    1. Class Pair

  520. GroupGroup

    1. Group PairwiseLocalAlignmentAlgorithms

  521. typedeftypedef

    1. typedef Pam120

  522. typedeftypedef

    1. typedef Pam200

  523. typedeftypedef

    1. typedef Pam250

  524. typedeftypedef

    1. typedef Pam40

  525. GroupGroup

    1. Group ParallelismTags

  526. SpecSpec

    1. Spec ParseError

  527. fn()fn()

    1. fn() partialSum

  528. ClassClass

    1. Class Pattern

  529. typedeftypedef

    1. typedef Peptide

  530. typedeftypedef

    1. typedef PeptideIterator

  531. SpecSpec

    1. Spec PexPattern

  532. SpecSpec

    1. Spec PigeonholeFinder

  533. ClassClass

    1. Class PigeonholeParameters

  534. SpecSpec

    1. Spec PigeonholePattern

  535. ClassClass

    1. Class Pipe

  536. SpecSpec

    1. Spec PizzaChiliIndex

  537. GroupGroup

    1. Group PizzaChiliIndexFibres

  538. GroupGroup

    1. Group PizzaChiliIndexTags

  539. SpecSpec

    1. Spec PizzaChiliString

  540. #define#define

    1. #define PLATFORM_GCC

  541. ClassClass

    1. Class PointAndCargo

  542. ClassClass

    1. Class Pool

  543. SpecSpec

    1. Spec PoolConfig

  544. SpecSpec

    1. Spec PoolConfigSize

  545. SpecSpec

    1. Spec PoolSpec

  546. fn()fn()

    1. fn() popCount

  547. Fn<>Fn<>

    1. Fn<> Position

  548. GroupGroup

    1. Group PositionCalculation

  549. SpecSpec

    1. Spec PositionIterator

  550. GroupGroup

    1. Group PrefixOrderTags

  551. SpecSpec

    1. Spec PrefixSegment

  552. fn()fn()

    1. fn() primsAlgorithm

  553. fn()fn()

    1. fn() printDebugLevel

  554. SpecSpec

    1. Spec PriorityHeap

  555. ClassClass

    1. Class PriorityType

  556. ClassClass

    1. Class ProfileChar

  557. SpecSpec

    1. Spec ProfileSeqFracScore

  558. SpecSpec

    1. Spec ProfileSeqScore

  559. fn()fn()

    1. fn() progressiveAlignment

  560. ConceptConcept

    1. Concept PropertyMapConcept

  561. ClassClass

    1. Class Proxy

  562. GroupGroup

    1. Group QGramIndexFibres

  563. ConceptConcept

    1. Concept RandomAccessContainerConcept

  564. ConceptConcept

    1. Concept RandomAccessIteratorConcept

  565. ClassClass

    1. Class Range

  566. ClassClass

    1. Class RankDictionary

  567. GroupGroup

    1. Group RankDictionaryFibres

  568. ClassClass

    1. Class RankSupportBitString

  569. GroupGroup

    1. Group RankSupportBitStringFibres

  570. fn()fn()

    1. fn() readEmblHeader

  571. ClassClass

    1. Class ReadStoreElement

  572. fn()fn()

    1. fn() reAlign

  573. fn()fn()

    1. fn() reAlignment

  574. SpecSpec

    1. Spec ReducedAminoAcid

  575. Fn<>Fn<>

    1. Fn<> Reference

  576. Fn<>Fn<>

    1. Fn<> RemoveConst

  577. Fn<>Fn<>

    1. Fn<> RemovePointer

  578. Fn<>Fn<>

    1. Fn<> RemoveReference

  579. Fn<>Fn<>

    1. Fn<> RemoveView

  580. ClassClass

    1. Class Repeat

  581. SpecSpec

    1. Spec ResizableContainerView

  582. fn()fn()

    1. fn() reverse

  583. fn()fn()

    1. fn() reverseComplement

  584. ConceptConcept

    1. Concept ReversibleContainerConcept

  585. ClassClass

    1. Class RevTextFibre

  586. ClassClass

    1. Class RightArrayBinaryTree

  587. GroupGroup

    1. Group RightArrayBinaryTreeFibres

  588. SpecSpec

    1. Spec RightArrayBinaryTreeIterator

  589. SpecSpec

    1. Spec Rna

  590. SpecSpec

    1. Spec Rna5

  591. typedeftypedef

    1. typedef Rna5Iterator

  592. typedeftypedef

    1. typedef Rna5String

  593. typedeftypedef

    1. typedef Rna5StringComplement

  594. typedeftypedef

    1. typedef Rna5StringReverse

  595. typedeftypedef

    1. typedef Rna5StringReverseComplement

  596. typedeftypedef

    1. typedef RnaIterator

  597. typedeftypedef

    1. typedef RnaString

  598. typedeftypedef

    1. typedef RnaStringComplement

  599. typedeftypedef

    1. typedef RnaStringReverse

  600. typedeftypedef

    1. typedef RnaStringReverseComplement

  601. SpecSpec

    1. Spec RoiFileIn

  602. SpecSpec

    1. Spec RoiFileOut

  603. ConceptConcept

    1. Concept RootedIteratorConcept

  604. ConceptConcept

    1. Concept RootedRandomAccessIteratorConcept

  605. ClassClass

    1. Class RuntimeError

  606. SpecSpec

    1. Spec Sampler

  607. Fn<>Fn<>

    1. Fn<> SAValue

  608. ClassClass

    1. Class Score

  609. ClassClass

    1. Class Seed

  610. ClassClass

    1. Class SeedDiagonal

  611. GroupGroup

    1. Group SeedExtensionTags

  612. ClassClass

    1. Class SeedSet

  613. ClassClass

    1. Class Segment

  614. ConceptConcept

    1. Concept SegmentableConcept

  615. GroupGroup

    1. Group SegmentMatchGenerationTags

  616. typedeftypedef

    1. typedef SelectableAminoAcidMatrix

  617. ClassClass

    1. Class SentinelRankDictionary

  618. GroupGroup

    1. Group SentinelRankDictionaryFibres

  619. #define#define

    1. #define SEQAN_ENABLE_PARALLELISM

  620. #define#define

    1. #define SEQAN_HAS_BZIP2

  621. #define#define

    1. #define SEQAN_HAS_ZLIB

  622. #define#define

    1. #define SEQAN_IS_32_BIT

  623. #define#define

    1. #define SEQAN_IS_64_BIT

  624. #define#define

    1. #define SEQAN_OMP_PRAGMA

  625. #define#define

    1. #define SEQAN_PATH_TO_ROOT

  626. #define#define

    1. #define SEQAN_TEMP_FILENAME

  627. SpecSpec

    1. Spec SeqFileIn

  628. SpecSpec

    1. Spec SeqFileOut

  629. ClassClass

    1. Class SequenceOutputOptions

  630. fn()fn()

    1. fn() setBit

  631. fn()fn()

    1. fn() setBitTo

  632. SpecSpec

    1. Spec SetHorspoolPattern

  633. ClassClass

    1. Class Shape

  634. fn()fn()

    1. fn() shareResources

  635. SpecSpec

    1. Spec ShiftAndPattern

  636. SpecSpec

    1. Spec Shifter

  637. SpecSpec

    1. Spec ShiftOrPattern

  638. fn()fn()

    1. fn() shuffle

  639. ConceptConcept

    1. Concept SignedIntegerConcept

  640. SpecSpec

    1. Spec SimpleAllocator

  641. SpecSpec

    1. Spec SimpleHolder

  642. SpecSpec

    1. Spec SimpleIntervalsFileIn

  643. SpecSpec

    1. Spec SimpleIntervalsFileInOut

  644. ClassClass

    1. Class SimpleIntervalsIOContext

  645. SpecSpec

    1. Spec SimplePattern

  646. SpecSpec

    1. Spec SimpleScore

  647. typedeftypedef

    1. typedef SimpleScoreTypedef

  648. SpecSpec

    1. Spec SimpleSeed

  649. SpecSpec

    1. Spec SimpleShape

  650. ClassClass

    1. Class SimpleType

  651. SpecSpec

    1. Spec SinglePoolAllocator

  652. Fn<>Fn<>

    1. Fn<> Size

  653. SpecSpec

    1. Spec Skiplist

  654. fn()fn()

    1. fn() sortAlignedReads

  655. GroupGroup

    1. Group SortAlignedReadTags

  656. SpecSpec

    1. Spec SorterConfig

  657. SpecSpec

    1. Spec SorterConfigSize

  658. SpecSpec

    1. Spec SorterSpec

  659. SpecSpec

    1. Spec Source

  660. ClassClass

    1. Class SparseString

  661. GroupGroup

    1. Group SparseStringFibres

  662. Fn<>Fn<>

    1. Fn<> Spec

  663. fn()fn()

    1. fn() splitAlignment

  664. fn()fn()

    1. fn() splitGenBankHeader

  665. ClassClass

    1. Class Splitter

  666. GroupGroup

    1. Group StandardIntegers

  667. fn()fn()

    1. fn() startsWith

  668. SpecSpec

    1. Spec StdAdaptorIterator

  669. SpecSpec

    1. Spec StoreIntervalsIntervalTreeNode

  670. SpecSpec

    1. Spec StorePointsOnlyIntervalTreeNode

  671. ClassClass

    1. Class StreamBuffer

  672. ConceptConcept

    1. Concept StreamConcept

  673. GroupGroup

    1. Group StreamFormats

  674. SpecSpec

    1. Spec StreamIterator

  675. ClassClass

    1. Class String

  676. ConceptConcept

    1. Concept StringConcept

  677. ClassClass

    1. Class StringEnumerator

  678. ConceptConcept

    1. Concept StringIndexConcept

  679. ClassClass

    1. Class StringSet

  680. fn()fn()

    1. fn() stringToStringSet

  681. ConceptConcept

    1. Concept StringTreeConcept

  682. ConceptConcept

    1. Concept StringTrieConcept

  683. fn()fn()

    1. fn() stronglyConnectedComponents

  684. SpecSpec

    1. Spec SuffixSegment

  685. fn()fn()

    1. fn() sum

  686. fn()fn()

    1. fn() sumOfPairsScore

  687. SpecSpec

    1. Spec SuperMaxRepeatsFastIterator

  688. SpecSpec

    1. Spec SuperMaxRepeatsIterator

  689. SpecSpec

    1. Spec SwiftFinder

  690. SpecSpec

    1. Spec SwiftLocalFinder

  691. SpecSpec

    1. Spec SwiftLocalPattern

  692. ClassClass

    1. Class SwiftParameters

  693. SpecSpec

    1. Spec SwiftPattern

  694. SpecSpec

    1. Spec SwiftSemiGlobalFinder

  695. SpecSpec

    1. Spec SwiftSemiGlobalPattern

  696. SpecSpec

    1. Spec SyncFile

  697. fn()fn()

    1. fn() sysTime

  698. ClassClass

    1. Class TabixIndex

  699. ClassClass

    1. Class Tag

  700. ClassClass

    1. Class TagList

  701. ClassClass

    1. Class TagSelector

  702. fn()fn()

    1. fn() testAllOnes

  703. fn()fn()

    1. fn() testAllZeros

  704. GroupGroup

    1. Group TestSystemMacros

  705. ConceptConcept

    1. Concept TextConcept

  706. SpecSpec

    1. Spec TightDependentStringSet

  707. fn()fn()

    1. fn() toLower

  708. ClassClass

    1. Class ToolDoc

  709. GroupGroup

    1. Group TopDown

  710. SpecSpec

    1. Spec TopDownHistoryIterator

  711. SpecSpec

    1. Spec TopDownIterator

  712. fn()fn()

    1. fn() topologicalSort

  713. ClassClass

    1. Class ToStdAllocator

  714. fn()fn()

    1. fn() toUpper

  715. typedeftypedef

    1. typedef TraceBack

  716. fn()fn()

    1. fn() transitiveClosure

  717. fn()fn()

    1. fn() translate

  718. enumenum

    1. enum TranslationFrames

  719. SpecSpec

    1. Spec Tree

  720. SpecSpec

    1. Spec TrieBfamPattern

  721. ClassClass

    1. Class Triple

  722. fn()fn()

    1. fn() tripletLibraryExtension

  723. SpecSpec

    1. Spec TristateHolder

  724. ClassClass

    1. Class Tuple

  725. SpecSpec

    1. Spec Tupler

  726. fn()fn()

    1. fn() TView

  727. SpecSpec

    1. Spec TwoLevelRankDictionary

  728. SpecSpec

    1. Spec UcscFileIn

  729. SpecSpec

    1. Spec UcscFileOut

  730. ClassClass

    1. Class UcscIOContext

  731. ClassClass

    1. Class UcscRecord

  732. SpecSpec

    1. Spec UnbandedLocalAlignmentEnumerator

  733. SpecSpec

    1. Spec UndirectedGraph

  734. SpecSpec

    1. Spec UnexpectedEnd

  735. SpecSpec

    1. Spec UngappedShape

  736. typedeftypedef

    1. typedef UnicodeString

  737. ClassClass

    1. Class UnionFind

  738. ConceptConcept

    1. Concept UnsignedIntegerConcept

  739. GroupGroup

    1. Group UpgmaConfiguratorTags

  740. fn()fn()

    1. fn() upgmaTree

  741. fn()fn()

    1. fn() upperBoundAlignedReads

  742. Fn<>Fn<>

    1. Fn<> Value

  743. fn()fn()

    1. fn() valueConstruct

  744. fn()fn()

    1. fn() valueDestruct

  745. fn()fn()

    1. fn() variance

  746. SpecSpec

    1. Spec VcfFileIn

  747. SpecSpec

    1. Spec VcfFileOut

  748. ClassClass

    1. Class VcfHeader

  749. ClassClass

    1. Class VcfHeaderRecord

  750. ClassClass

    1. Class VcfIOContext

  751. ClassClass

    1. Class VcfRecord

  752. SpecSpec

    1. Spec VectorSet

  753. Fn<>Fn<>

    1. Fn<> VertexDescriptor

  754. SpecSpec

    1. Spec VertexIterator

  755. Fn<>Fn<>

    1. Fn<> View

  756. ClassClass

    1. Class VirtualStream

  757. ClassClass

    1. Class VolatilePtr

  758. SpecSpec

    1. Spec VSTreeIterator

  759. typedeftypedef

    1. typedef Vtml200

  760. SpecSpec

    1. Spec WaveletTree

  761. GroupGroup

    1. Group WaveletTreeFibres

  762. fn()fn()

    1. fn() weaklyConnectedComponents

  763. Fn<>Fn<>

    1. Fn<> WEIGHT

  764. SpecSpec

    1. Spec WildShiftAndPattern

  765. SpecSpec

    1. Spec WordGraph

  766. GroupGroup

    1. Group WOTDIndexFibres

  767. SpecSpec

    1. Spec WuManberPattern

  768. SpecSpec

    1. Spec ZipContainerView

  769. SpecSpec

    1. Spec ZipIterator

  770. fn()fn()

    1. fn() zscore