input_format_concept.hpp File Reference

Provides seqan3::alignment_file_input_format and auxiliary classes. More...

#include <fstream>
#include <string>
#include <vector>
#include <seqan3/alphabet/cigar/cigar.hpp>
#include <seqan3/alphabet/gap/gapped.hpp>
#include <seqan3/alphabet/nucleotide/dna4.hpp>
#include <seqan3/alphabet/nucleotide/dna5.hpp>
#include <seqan3/alphabet/quality/aliases.hpp>
#include <seqan3/alphabet/quality/phred42.hpp>
#include <seqan3/core/type_list/type_list.hpp>
#include <seqan3/io/alignment_file/header.hpp>
#include <seqan3/io/alignment_file/input_options.hpp>
#include <seqan3/io/alignment_file/misc.hpp>
#include <seqan3/io/alignment_file/sam_tag_dictionary.hpp>

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Namespaces
	seqan3
	The main SeqAn3 namespace.

Detailed Description

Provides seqan3::alignment_file_input_format and auxiliary classes.

Author

Svenja Mehringer <svenja.mehringer AT fu-berlin.de>