seqan3::align_cfg::output_score Class Reference

Configures the alignment result to output the score. More...

#include <seqan3/alignment/configuration/align_config_output.hpp>

Inheritance diagram for seqan3::align_cfg::output_score:

Public Member Functions
Constructor, destructor and assignment
constexpr	output_score ()=default
	Defaulted.
constexpr	output_score (output_score const &)=default
	Defaulted.
constexpr	output_score (output_score &&)=default
	Defaulted.
constexpr output_score &	operator= (output_score const &)=default
	Defaulted.
constexpr output_score &	operator= (output_score &&)=default
	Defaulted.
	~output_score ()=default
	Defaulted.

Detailed Description

Configures the alignment result to output the score.

This option forces the alignment to compute and output the score. If this option is not set in the alignment configuration, accessing the score via the seqan3::alignment_result object is forbidden and will lead to a compile time error.

Example

// SPDX-FileCopyrightText: 2006-2025 Knut Reinert & Freie Universität Berlin
// SPDX-FileCopyrightText: 2016-2025 Knut Reinert & MPI für molekulare Genetik
// SPDX-License-Identifier: CC0-1.0
 
#include <seqan3/alignment/configuration/align_config_output.hpp>
 
int main()
{
    // Compute only the score.
    seqan3::configuration cfg = seqan3::align_cfg::output_score{};
}

See also

seqan3::align_cfg::output_end_position

seqan3::align_cfg::output_begin_position

seqan3::align_cfg::output_alignment

seqan3::align_cfg::output_sequence1_id

seqan3::align_cfg::output_sequence2_id

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The documentation for this class was generated from the following file:

• align_config_output.hpp