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HIBF 1.0.0-rc.1
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| ▼Nseqan | |
| ▼Nhibf | |
| ▼Nbuild | |
| Cbin_size_parameters | Contains parameters for bin_size_in_bits |
| Cbuild_data | Contains information used for building |
| ▼Nlayout | |
| ▼Cdata_store | Contains information used for the layout |
| Cprevious_level | Stores information of the previous level of a given IBF |
| Cfpr_correction_parameters | Contains parameters for compute_fpr_correction |
| ▼Cgraph | Contains the layout graph structure |
| Cnode | |
| Chierarchical_binning | Hierarchical binning algorithm |
| ▼Clayout | The layout |
| Cmax_bin | |
| Cuser_bin | |
| Csimple_binning | Distributes x Technical Bins across y User Bins while minimizing the maximal Technical Bin size |
| ▼Nsketch | |
| ▼Ntoolbox | |
| Cclustering_node | Type for a node in the clustering tree when for the rearrangement |
| Centry | Entry of the distance matrix that has the id of a cluster with its neighbors in a prio queue |
| Cneighbor | Element of the second priority queue layer of the distance matrix |
| Chyperloglog | HyperLogLog estimates |
| Cminhashes | MinHash sketches design to be used for Locality sensitive hashing |
| Cbin_count | A strong type that represents the number of bins for the seqan::hibf::interleaved_bloom_filter |
| Cbin_index | A strong type that represents the bin index for the seqan::hibf::interleaved_bloom_filter |
| Cbin_size | A strong type that represents the number of bits for each bin in the seqan::hibf::interleaved_bloom_filter |
| Cbit_vector | An bit vector |
| Cconcurrent_timer | A timer with a thread-safe operator+=() |
| Cconfig | The configuration used to build an (H)IBF |
| Ccounting_vector | A data structure that behaves like a std::vector and can be used to consolidate the results of multiple calls to seqan::hibf::interleaved_bloom_filter::membership_agent_type::bulk_contains |
| Chash_function_count | A strong type that represents the number of hash functions for the seqan::hibf::interleaved_bloom_filter |
| ▼Chierarchical_interleaved_bloom_filter | The Hierarchical Interleaved Bloom Filter (HIBF) - Fast answers to set-membership queries for multiple bins |
| Ccounting_agent_type | Manages counting ranges of values for the seqan::hibf::hierarchical_interleaved_bloom_filter |
| Cmembership_agent_type | |
| Cinsert_iterator | |
| ▼Cinterleaved_bloom_filter | The IBF binning directory. A data structure that efficiently answers set-membership queries for multiple bins |
| Ccounting_agent_type | Manages counting ranges of values for the seqan::hibf::interleaved_bloom_filter |
| Cmembership_agent_type | Manages membership queries for the seqan::hibf::interleaved_bloom_filter |
| Cmd_vector | |
| Cprint_t | |
| Cserial_timer | A timer |