Function
createQGramIndex
Builds a q-gram index on a sequence.
createQGramIndex(sa, dir, text, shape)
Parameters
text
The sequence.
shape
The shape to be used.
Types: Shape
sa
The resulting list in which all q-grams are sorted alphabetically.
dir
The resulting array that indicates at which position in index the corresponding q-grams can be found.
Return Values
Index contains the sorted list of qgrams. For each possible q-gram pos contains the first position in index that corresponds to this q-gram.
SeqAn - Sequence Analysis Library - www.seqan.de