Function
alignment
Returns an alignment of the occurences of the representative substring in the index text.
Parameters
An iterator of a Suffix Tree. Types: VSTree Iterator |
Return Values
A local alignment corresponding to the seed of the iterator .
Remarks
The representative must uniquely occur in every sequence (e.g. in MUMs),
otherwise the seed returned is one many.
SeqAn - Sequence Analysis Library - www.seqan.de