Function
alignmentEvaluation
Given a multiple alignment, this function calculates all kinds of alignment statistics.
Parameters
An alignment graph. Types: Alignment Graph | |
A score object. Types: Score | |
Number of gap extensions. | |
Number of gaps. | |
Number of aligned pairs. | |
Counter for each pair. | |
Alignment length. |
Return Values
Score of the alignment.
SeqAn - Sequence Analysis Library - www.seqan.de