Function
getKmerSimilarityMatrix
Creates a matrix storing the number of common q-grams between all pairs of sequences.
Parameters
A q-gram index. Types: Index_QGram | |
The resulting q-gram similarity matrix. Types: Container | |
Contains sequence numbers if only a subset of sequences should be compared. Types: Container |
Remarks
SeqAn - Sequence Analysis Library - www.seqan.de