fn() buildAlignmentGraph
Builds an AlignmentGraph from a seqt of input alignments.

Defined in <seqan/graph_msa.h>
Signature void buildAlignmentGraph(matches[, score], outGraph, tag); void buildAlignmentGraph(matches, score, outGraph, scoreType, ReScore);

Parameters

matches A String of alignments, e.g. Fragment or Align.
score A String of score values.
outGraph An AlignmentGraph with a previously filled DependentStringSet.
scoreType A Score type.
tag A tag indicating the score of matches. See AlignmentGraphCombinationTags.

Detailed Description

Calls the function matchRefinement and adapts the scores according to tag.

Data Races

Thread safety unknown!