SeqAn3 3.4.0-rc.1
The Modern C++ library for sequence analysis.
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seqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits > Member List

This is the complete list of members for seqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >, including all inherited members.

_trace_matrixseqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >protected
align_config_type typedefseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >
alignment() const noexceptseqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >inline
alignment_result_type typedefseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >
alignment_traits_type typedefseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >
begin_positions() const noexceptseqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >inline
compute_begin_positionsseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >static
compute_end_positionsseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >static
compute_matrixseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >static
compute_scoreseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >static
compute_score_matrixseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >static
compute_sequence_alignmentseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >static
compute_trace_matrixseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >static
database_iterator typedefseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >
database_type typedefseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >
dbseqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >protected
derived_tseqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >protected
edit_distance_unbanded_trace_matrix_policy() noexcept=defaultseqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >protected
edit_distance_unbanded_trace_matrix_policy(edit_distance_unbanded_trace_matrix_policy const &) noexcept=defaultseqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >protected
edit_distance_unbanded_trace_matrix_policy(edit_distance_unbanded_trace_matrix_policy &&) noexcept=defaultseqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >protected
hpseqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >protected
is_globalseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >static
is_semi_globalseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >static
operator=(edit_distance_unbanded_trace_matrix_policy const &) noexcept=defaultseqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >protected
operator=(edit_distance_unbanded_trace_matrix_policy &&) noexcept=defaultseqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >protected
query_alphabet_type typedefseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >
query_type typedefseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >
result_value_type typedefseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >
score_matrix_type typedefseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >
score_type typedefseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >
trace_matrix() const noexceptseqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >inline
trace_matrix_init(size_t block_count)seqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >inlineprotected
trace_matrix_type typedefseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >
use_max_errorsseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >static
word_sizeseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >static
word_type typedefseqan3::detail::default_edit_distance_trait_type< database_t, query_t, align_config_t, is_semi_global_t, word_t >
~edit_distance_unbanded_trace_matrix_policy() noexcept=defaultseqan3::detail::edit_distance_unbanded_trace_matrix_policy< derived_t, edit_traits >protected
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