SeqAn3 3.4.0-rc.1
The Modern C++ library for sequence analysis.
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seqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t > Member List

This is the complete list of members for seqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >, including all inherited members.

affine_cell_type typedefseqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >protected
affine_score_tuple_t typedefseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >protected
affine_trace_tuple_t typedefseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >protected
base_t typedefseqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >protected
compute_inner_cell(score_type diagonal_score, affine_cell_t previous_cell, score_type const sequence_score) const noexceptseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >inlineprotected
first_column_is_freeseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >protected
first_row_is_freeseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >protected
gap_extension_scoreseqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >protected
gap_open_scoreseqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >protected
initialise_band_first_cell(score_type diagonal_score, affine_cell_t previous_cell, score_type const sequence_score) const noexceptseqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >inlineprotected
initialise_first_column_cell(affine_cell_t previous_cell) const noexceptseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >inlineprotected
initialise_first_row_cell(affine_cell_t previous_cell) const noexceptseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >inlineprotected
initialise_origin_cell() const noexceptseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >inlineprotected
lowest_viable_score() const noexceptseqan3::detail::policy_affine_gap_recursion< alignment_configuration_t >inlineprotected
maybe_convert_to_simd(score_t &&score) const noexceptseqan3::detail::policy_affine_gap_recursion< alignment_configuration_t >inlineprotected
operator=(policy_affine_gap_with_trace_recursion_banded const &)=defaultseqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >protected
operator=(policy_affine_gap_with_trace_recursion_banded &&)=defaultseqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >protected
seqan3::detail::policy_affine_gap_with_trace_recursion::operator=(policy_affine_gap_with_trace_recursion const &)=defaultseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >protected
seqan3::detail::policy_affine_gap_with_trace_recursion::operator=(policy_affine_gap_with_trace_recursion &&)=defaultseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >protected
seqan3::detail::policy_affine_gap_recursion::operator=(policy_affine_gap_recursion const &)=defaultseqan3::detail::policy_affine_gap_recursion< alignment_configuration_t >protected
seqan3::detail::policy_affine_gap_recursion::operator=(policy_affine_gap_recursion &&)=defaultseqan3::detail::policy_affine_gap_recursion< alignment_configuration_t >protected
original_score_type typedefseqan3::detail::policy_affine_gap_recursion< alignment_configuration_t >protected
policy_affine_gap_recursion()=defaultseqan3::detail::policy_affine_gap_recursion< alignment_configuration_t >protected
policy_affine_gap_recursion(policy_affine_gap_recursion const &)=defaultseqan3::detail::policy_affine_gap_recursion< alignment_configuration_t >protected
policy_affine_gap_recursion(policy_affine_gap_recursion &&)=defaultseqan3::detail::policy_affine_gap_recursion< alignment_configuration_t >protected
policy_affine_gap_recursion(alignment_configuration_t const &config)seqan3::detail::policy_affine_gap_recursion< alignment_configuration_t >inlineexplicitprotected
policy_affine_gap_with_trace_recursion()=defaultseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >protected
policy_affine_gap_with_trace_recursion(policy_affine_gap_with_trace_recursion const &)=defaultseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >protected
policy_affine_gap_with_trace_recursion(policy_affine_gap_with_trace_recursion &&)=defaultseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >protected
policy_affine_gap_with_trace_recursion(alignment_configuration_t const &config)seqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >inlineexplicitprotected
policy_affine_gap_with_trace_recursion_banded()=defaultseqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >protected
policy_affine_gap_with_trace_recursion_banded(policy_affine_gap_with_trace_recursion_banded const &)=defaultseqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >protected
policy_affine_gap_with_trace_recursion_banded(policy_affine_gap_with_trace_recursion_banded &&)=defaultseqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >protected
policy_affine_gap_with_trace_recursion_banded(alignment_configuration_t const &config)seqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >inlineexplicitprotected
score_type typedefseqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >protected
trace_type typedefseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >protected
traits_type typedefseqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >protected
~policy_affine_gap_recursion()=defaultseqan3::detail::policy_affine_gap_recursion< alignment_configuration_t >protected
~policy_affine_gap_with_trace_recursion()=defaultseqan3::detail::policy_affine_gap_with_trace_recursion< alignment_configuration_t >protected
~policy_affine_gap_with_trace_recursion_banded()=defaultseqan3::detail::policy_affine_gap_with_trace_recursion_banded< alignment_configuration_t >protected
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