SeqAn3 3.4.0-rc.1
The Modern C++ library for sequence analysis.
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seqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t > Member List

This is the complete list of members for seqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >, including all inherited members.

affine_gap_init_policyseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >friend
alignment_algorithm_tseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >private
check_and_update(cell_t const &cell, alignment_algorithm_state< score_t > &state) const noexceptseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >inlineprivate
check_and_update(cell_t const &cell, alignment_algorithm_state< score_t > &state) const noexceptseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >inlineprivate
check_score_of_cell(cell_t const &current_cell, alignment_algorithm_state< score_t > &state) const noexceptseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >inlineprotected
check_score_of_cells_in_last_column(alignment_column_t &&last_column, alignment_algorithm_state< score_t > &state) const noexceptseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >inlineprotected
check_score_of_last_cell(cell_t const &last_cell, alignment_algorithm_state< score_t > &state) const noexceptseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >inlineprotected
check_score_of_last_row_cell(cell_t const &last_row_cell, alignment_algorithm_state< score_t > &state) const noexceptseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >inlineprotected
coordinate_offsetseqan3::detail::simd_global_alignment_state< simd_t >
initialise_find_optimum_policy(sequence1_collection_t &&sequence1_collection, sequence2_collection_t &&sequence2_collection, score_t const padding_score)seqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >inlineprotected
is_global_alignmentseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >private
last_column_maskseqan3::detail::simd_global_alignment_state< simd_t >
last_row_maskseqan3::detail::simd_global_alignment_state< simd_t >
operator=(simd_find_optimum_policy const &)=defaultseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >private
operator=(simd_find_optimum_policy &&)=defaultseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >private
score_offsetseqan3::detail::simd_global_alignment_state< simd_t >
simd_affine_gap_policyseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >friend
simd_find_optimum_policy()=defaultseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >private
simd_find_optimum_policy(simd_find_optimum_policy const &)=defaultseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >private
simd_find_optimum_policy(simd_find_optimum_policy &&)=defaultseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >private
simd_find_optimum_policy(configuration_t const &config)seqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >inlineprivate
test_every_cellseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >private
test_last_column_cellseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >private
test_last_row_cellseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >private
~simd_find_optimum_policy()=defaultseqan3::detail::simd_find_optimum_policy< alignment_algorithm_t, simd_t >private
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