seqan/3-master-dev/pairwise__alignment__concept_8hpp_source.html

// SPDX-FileCopyrightText: 2006-2024 Knut Reinert & Freie Universität Berlin

// SPDX-FileCopyrightText: 2016-2024 Knut Reinert & MPI für molekulare Genetik

// SPDX-License-Identifier: BSD-3-Clause


#pragma once


#include <tuple>


#include <seqan3/alignment/aligned_sequence/aligned_sequence_concept.hpp>

#include <seqan3/utility/tuple/concept.hpp>


namespace seqan3::detail

{


template <typename pairwise_alignment_t>

concept pairwise_alignment = pair_like<pairwise_alignment_t>

                          && aligned_sequence<std::tuple_element_t<0, std::remove_reference_t<pairwise_alignment_t>>>

                          && aligned_sequence<std::tuple_element_t<1, std::remove_reference_t<pairwise_alignment_t>>>;


template <typename pairwise_alignment_t>

concept writable_pairwise_alignment =

    pairwise_alignment<pairwise_alignment_t>

    && writable_aligned_sequence<std::tuple_element_t<0, std::remove_reference_t<pairwise_alignment_t>>>

    && writable_aligned_sequence<std::tuple_element_t<1, std::remove_reference_t<pairwise_alignment_t>>>;


} // namespace seqan3::detail

aligned_sequence_concept.hpp
Includes the aligned_sequence and the related insert_gap and erase_gap functions to enable stl contai...

aligned_sequence
The generic concept for an aligned sequence.

pairwise_alignment
A concept that models a pairwise alignment type.

writable_pairwise_alignment
A concept that models a writable pairwise alignment type.

pair_like
Whether a type behaves like a tuple with exactly two elements.

writable_aligned_sequence
The generic concept for an aligned sequence that is writable.

seqan3::detail
The internal SeqAn3 namespace.
Definition aligned_sequence_concept.hpp:26

tuple

concept.hpp
Provides seqan3::tuple_like.