SeqAn3 3.4.0-rc.1
The Modern C++ library for sequence analysis.
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Composite

Provides templates for combining existing alphabets into new alphabet types. More...

+ Collaboration diagram for Composite:

Classes

class  seqan3::alphabet_tuple_base< derived_type, component_types >
 The CRTP base for a combined alphabet that contains multiple values of different alphabets at the same time.. More...
 
class  seqan3::alphabet_variant< alternative_types >
 A combined alphabet that can hold values of either of its alternatives.. More...
 
class  seqan3::semialphabet_any< size >
 A semi-alphabet that type erases all other semi-alphabets of the same size. More...
 
struct  std::tuple_element< i, tuple_t >
 Obtains the type of the specified element. More...
 
struct  std::tuple_size< tuple_t >
 Provides access to the number of elements in a tuple as a compile-time constant expression. More...
 

Detailed Description

Provides templates for combining existing alphabets into new alphabet types.

See also
Alphabet

Introduction

This module provides various class templates that allow you to combine existing alphabets into new ones. For example, you can add new characters to existing alphabets by using seqan3::alphabet_variant or combine alphabets with quality information by using seqan3::alphabet_tuple_base.

We have currently three major composite alphabets:

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