SeqAn3  3.0.0
The Modern C++ library for sequence analysis.
convert.hpp
1 // -----------------------------------------------------------------------------------------------------
2 // Copyright (c) 2006-2019, Knut Reinert & Freie Universität Berlin
3 // Copyright (c) 2016-2019, Knut Reinert & MPI für molekulare Genetik
4 // This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5 // shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
6 // -----------------------------------------------------------------------------------------------------
7 
15 #pragma once
16 
17 #include <algorithm>
18 #include <array>
19 
22 
23 // ============================================================================
24 // conversion to/from char/rank types
25 // ============================================================================
26 
27 namespace seqan3::detail
28 {
29 
36 template <Alphabet out_t, Alphabet in_t>
37 constexpr std::array<out_t, alphabet_size<in_t>> convert_through_char_representation
38 {
39  [] () constexpr
40  {
42  for (typename in_t::rank_type i = 0; i < alphabet_size<in_t>; ++i)
43  assign_char_to(to_char(assign_rank_to(i, in_t{})), ret[i]);
44  return ret;
45  }()
46 };
47 
48 } // namespace seqan3::detail
constexpr auto assign_rank_to
Assign a rank to an alphabet object.
Definition: concept.hpp:207
constexpr auto to_char
Return the char representation of an alphabet object.
Definition: concept.hpp:285
Definition: aligned_sequence_concept.hpp:35
Core alphabet concept and free function/type trait wrappers.
constexpr auto assign_char_to
Assign a character to an alphabet object.
Definition: concept.hpp:395
Quality alphabet concept.