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SeqAn3
3.0.2
The Modern C++ library for sequence analysis.
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Go to the documentation of this file.
52 gap_cost_affine{open_score{0}, extension_score{-1}};
Provides seqan3::align_config::gap_cost_affine.
Provides seqan3::align_cfg::scoring_scheme.
Provides seqan3::detail::configuration and utility functions.
A data structure for managing and computing the score of two nucleotides.
Definition: nucleotide_scoring_scheme.hpp:38
Provides seqan3::nucleotide_scoring_scheme.
constexpr configuration edit_scheme
Shortcut for edit distance configuration.
Definition: align_config_edit.hpp:51
Collection of elements to configure an algorithm.
Definition: configuration.hpp:82
A special sub namespace for the alignment configurations.
Definition: align_config_band.hpp:23
Sets the scoring scheme for the alignment algorithm.
Definition: align_config_scoring_scheme.hpp:45