SeqAn3  3.0.3
The Modern C++ library for sequence analysis.

pairwise → matrix Relation

File in seqan3/alignment/pairwiseIncludes file in seqan3/alignment/matrix
align_result_selector.hppdetail / advanceable_alignment_coordinate.hpp
align_result_selector.hppdetail / aligned_sequence_builder.hpp
align_result_selector.hpptrace_directions.hpp
align_result_selector.hppdetail / two_dimensional_matrix.hpp
alignment_algorithm.hppdetail / aligned_sequence_builder.hpp
alignment_algorithm.hpptrace_directions.hpp
detail / alignment_algorithm_state.hppalignment_optimum.hpp
alignment_configurator.hppdetail / alignment_score_matrix_one_column.hpp
alignment_configurator.hppdetail / alignment_score_matrix_one_column_banded.hpp
alignment_configurator.hppdetail / alignment_trace_matrix_full.hpp
alignment_configurator.hppdetail / alignment_trace_matrix_full_banded.hpp
alignment_configurator.hppdetail / combined_score_and_trace_matrix.hpp
alignment_configurator.hppdetail / score_matrix_single_column.hpp
alignment_configurator.hppdetail / trace_matrix_full.hpp
edit_distance_unbanded.hppdetail / advanceable_alignment_coordinate.hpp
edit_distance_unbanded.hppedit_distance_score_matrix_full.hpp
edit_distance_unbanded.hppedit_distance_trace_matrix_full.hpp
edit_distance_unbanded.hppmatrix_concept.hpp
detail / policy_affine_gap_recursion.hppdetail / affine_cell_proxy.hpp
detail / policy_alignment_matrix.hppdetail / coordinate_matrix.hpp
detail / policy_alignment_result_builder.hppdetail / aligned_sequence_builder.hpp
detail / policy_optimum_tracker.hppdetail / coordinate_matrix.hpp
detail / policy_optimum_tracker.hppdetail / matrix_coordinate.hpp
detail / type_traits.hppdetail / matrix_coordinate.hpp
detail / type_traits.hpptrace_directions.hpp
policy / affine_gap_init_policy.hpptrace_directions.hpp
policy / affine_gap_policy.hpptrace_directions.hpp
policy / find_optimum_policy.hppalignment_optimum.hpp
policy / simd_affine_gap_policy.hppalignment_optimum.hpp
policy / simd_affine_gap_policy.hpptrace_directions.hpp
policy / simd_find_optimum_policy.hppalignment_optimum.hpp