SeqAn3  3.0.3
The Modern C++ library for sequence analysis.
record.hpp File Reference

Provides the seqan3::record template and the seqan3::field enum. More...

#include <limits>
#include <tuple>
#include <seqan3/core/detail/template_inspection.hpp>
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Classes

struct  seqan3::fields< fs >
 A class template that holds a choice of seqan3::field. More...
 
struct  seqan3::record< field_types, field_ids >
 The class template that file records are based on; behaves like an std::tuple. More...
 
struct  std::tuple_element< elem_no, seqan3::record< field_types, field_ids > >
 Obtains the type of the specified element. More...
 
struct  std::tuple_size< seqan3::record< field_types, field_ids > >
 Provides access to the number of elements in a tuple as a compile-time constant expression. More...
 

Namespaces

 seqan3
 The main SeqAn3 namespace.
 
 std
 SeqAn specific customisations in the standard namespace.
 

Enumerations

enum class  seqan3::field {
  seqan3::seq , seqan3::id , seqan3::qual , seqan3::_seq_qual_deprecated ,
  seqan3::offset , seqan3::bpp , seqan3::structure , seqan3::structured_seq ,
  seqan3::energy , seqan3::react , seqan3::react_err , seqan3::comment ,
  seqan3::alignment , seqan3::ref_id , seqan3::ref_seq , seqan3::ref_offset ,
  seqan3::header_ptr , seqan3::flag , seqan3::mate , seqan3::mapq ,
  seqan3::cigar , seqan3::tags , seqan3::bit_score , seqan3::evalue ,
  seqan3::user_defined_0 , seqan3::user_defined_1 , seqan3::user_defined_2 , seqan3::user_defined_3 ,
  seqan3::user_defined_4 , seqan3::user_defined_5 , seqan3::user_defined_6 , seqan3::user_defined_7 ,
  seqan3::user_defined_8 , seqan3::user_defined_9 , seqan3::seq_qual = _seq_qual_deprecated , seqan3::SEQ = seq ,
  seqan3::ID = id , seqan3::QUAL = qual , seqan3::SEQ_QUAL = _seq_qual_deprecated , seqan3::OFFSET = offset ,
  seqan3::BPP = bpp , seqan3::STRUCTURE = structure , seqan3::STRUCTURED_SEQ = structured_seq , seqan3::ENERGY = energy ,
  seqan3::REACT = react , seqan3::REACT_ERR = react_err , seqan3::COMMENT = comment , seqan3::ALIGNMENT = alignment ,
  seqan3::REF_ID = ref_id , seqan3::REF_SEQ = ref_seq , seqan3::REF_OFFSET = ref_offset , seqan3::HEADER_PTR = header_ptr ,
  seqan3::FLAG = flag , seqan3::MATE = mate , seqan3::MAPQ = mapq , seqan3::CIGAR = cigar ,
  seqan3::TAGS = tags , seqan3::BIT_SCORE = bit_score , seqan3::EVALUE = evalue , seqan3::USER_DEFINED_0 = user_defined_0 ,
  seqan3::USER_DEFINED_1 = user_defined_1 , seqan3::USER_DEFINED_2 = user_defined_2 , seqan3::USER_DEFINED_3 = user_defined_3 , seqan3::USER_DEFINED_4 = user_defined_4 ,
  seqan3::USER_DEFINED_5 = user_defined_5 , seqan3::USER_DEFINED_6 = user_defined_6 , seqan3::USER_DEFINED_7 = user_defined_7 , seqan3::USER_DEFINED_8 = user_defined_8 ,
  seqan3::USER_DEFINED_9 = user_defined_9
}
 An enumerator for the fields used in file formats. More...
 

Detailed Description

Provides the seqan3::record template and the seqan3::field enum.

Author
Hannes Hauswedell <hannes.hauswedell AT fu-berlin.de>