52 gap_cost_affine{open_score{0}, extension_score{-1}};
Provides seqan3::align_config::gap_cost_affine.
Provides seqan3::align_cfg::scoring_scheme.
Sets the scoring scheme for the alignment algorithm.
Definition: align_config_scoring_scheme.hpp:45
Collection of elements to configure an algorithm.
Definition: configuration.hpp:45
A data structure for managing and computing the score of two nucleotides.
Definition: nucleotide_scoring_scheme.hpp:38
Provides seqan3::configuration and utility functions.
constexpr configuration edit_scheme
Shortcut for edit distance configuration.
Definition: align_config_edit.hpp:51
A special sub namespace for the alignment configurations.
Definition: align_config_band.hpp:25
Provides seqan3::nucleotide_scoring_scheme.