SeqAn3
3.1.0
The Modern C++ library for sequence analysis.
alignment → core Relation
File in seqan3/alignment
Includes file in seqan3/core
aligned_sequence
/
debug_stream_alignment.hpp
debug_stream
/
tuple.hpp
exception.hpp
platform.hpp
configuration
/
align_config_band.hpp
configuration
/
pipeable_config_element.hpp
configuration
/
align_config_band.hpp
detail
/
empty_type.hpp
configuration
/
align_config_band.hpp
detail
/
strong_type.hpp
configuration
/
align_config_debug.hpp
configuration
/
detail
/
configuration_element_debug_mode.hpp
configuration
/
align_config_debug.hpp
configuration
/
pipeable_config_element.hpp
configuration
/
align_config_edit.hpp
configuration
/
configuration.hpp
configuration
/
align_config_gap_cost_affine.hpp
configuration
/
pipeable_config_element.hpp
configuration
/
align_config_gap_cost_affine.hpp
detail
/
strong_type.hpp
configuration
/
align_config_method.hpp
configuration
/
pipeable_config_element.hpp
configuration
/
align_config_method.hpp
detail
/
empty_type.hpp
configuration
/
align_config_method.hpp
detail
/
strong_type.hpp
configuration
/
align_config_min_score.hpp
configuration
/
pipeable_config_element.hpp
configuration
/
align_config_on_result.hpp
configuration
/
pipeable_config_element.hpp
configuration
/
align_config_on_result.hpp
semiregular_box.hpp
configuration
/
align_config_output.hpp
configuration
/
pipeable_config_element.hpp
configuration
/
align_config_parallel.hpp
configuration
/
detail
/
configuration_element_parallel_mode.hpp
configuration
/
align_config_result_type.hpp
configuration
/
pipeable_config_element.hpp
configuration
/
align_config_score_type.hpp
configuration
/
pipeable_config_element.hpp
configuration
/
align_config_scoring_scheme.hpp
configuration
/
pipeable_config_element.hpp
configuration
/
align_config_vectorised.hpp
configuration
/
pipeable_config_element.hpp
configuration
/
align_config_vectorised.hpp
detail
/
empty_type.hpp
configuration
/
detail.hpp
configuration
/
detail
/
concept.hpp
scoring
/
detail
/
simd_match_mismatch_scoring_scheme.hpp
concept
/
cereal.hpp
scoring
/
detail
/
simd_matrix_scoring_scheme.hpp
concept
/
cereal.hpp
matrix
/
detail
/
advanceable_alignment_coordinate.hpp
debug_stream
/
debug_stream_type.hpp
matrix
/
detail
/
advanceable_alignment_coordinate.hpp
debug_stream
/
tuple.hpp
matrix
/
detail
/
advanceable_alignment_coordinate.hpp
detail
/
strong_type.hpp
matrix
/
detail
/
advanceable_alignment_coordinate.hpp
detail
/
template_inspection.hpp
matrix
/
detail
/
affine_cell_proxy.hpp
detail
/
empty_type.hpp
matrix
/
detail
/
aligned_sequence_builder.hpp
detail
/
is_class_template_declarable.hpp
matrix
/
detail
/
alignment_matrix_column_major_range_base.hpp
range
/
type_traits.hpp
matrix
/
detail
/
alignment_optimum.hpp
detail
/
template_inspection.hpp
matrix
/
detail
/
combined_score_and_trace_matrix.hpp
range
/
type_traits.hpp
matrix
/
detail
/
coordinate_matrix.hpp
detail
/
template_inspection.hpp
matrix
/
detail
/
debug_matrix.hpp
debug_stream
/
debug_stream_type.hpp
matrix
/
detail
/
debug_matrix.hpp
debug_stream
/
optional.hpp
matrix
/
detail
/
debug_matrix.hpp
debug_stream
/
range.hpp
matrix
/
detail
/
debug_matrix.hpp
detail
/
template_inspection.hpp
matrix
/
detail
/
matrix_coordinate.hpp
detail
/
strong_type.hpp
matrix
/
detail
/
trace_directions.hpp
add_enum_bitwise_operators.hpp
matrix
/
detail
/
trace_directions.hpp
debug_stream
/
debug_stream_type.hpp
matrix
/
detail
/
trace_matrix_full.hpp
detail
/
template_inspection.hpp
matrix
/
detail
/
two_dimensional_matrix.hpp
detail
/
deferred_crtp_base.hpp
matrix
/
detail
/
two_dimensional_matrix.hpp
detail
/
template_inspection.hpp
matrix
/
detail
/
two_dimensional_matrix.hpp
range
/
type_traits.hpp
matrix
/
detail
/
two_dimensional_matrix_iterator_base.hpp
detail
/
iterator_traits.hpp
pairwise
/
detail
/
pairwise_alignment_algorithm.hpp
detail
/
empty_type.hpp
pairwise
/
detail
/
policy_affine_gap_recursion.hpp
detail
/
template_inspection.hpp
pairwise
/
detail
/
policy_alignment_matrix.hpp
configuration
/
configuration.hpp
pairwise
/
detail
/
policy_alignment_matrix.hpp
detail
/
template_inspection.hpp
pairwise
/
detail
/
policy_alignment_result_builder.hpp
configuration
/
configuration.hpp
pairwise
/
detail
/
policy_alignment_result_builder.hpp
detail
/
empty_type.hpp
pairwise
/
detail
/
policy_alignment_result_builder.hpp
detail
/
template_inspection.hpp
pairwise
/
detail
/
policy_optimum_tracker.hpp
configuration
/
configuration.hpp
pairwise
/
detail
/
policy_optimum_tracker.hpp
detail
/
template_inspection.hpp
pairwise
/
detail
/
policy_scoring_scheme.hpp
configuration
/
configuration.hpp
pairwise
/
detail
/
type_traits.hpp
configuration
/
configuration.hpp
pairwise
/
detail
/
type_traits.hpp
detail
/
empty_type.hpp
pairwise
/
detail
/
type_traits.hpp
detail
/
template_inspection.hpp
matrix
/
all.hpp
platform.hpp
pairwise
/
align_result_selector.hpp
configuration
/
configuration.hpp
pairwise
/
align_result_selector.hpp
detail
/
template_inspection.hpp
pairwise
/
align_result_selector.hpp
range
/
type_traits.hpp
pairwise
/
alignment_algorithm.hpp
detail
/
deferred_crtp_base.hpp
pairwise
/
alignment_algorithm.hpp
detail
/
empty_type.hpp
pairwise
/
alignment_configurator.hpp
detail
/
deferred_crtp_base.hpp
pairwise
/
alignment_configurator.hpp
detail
/
template_inspection.hpp
pairwise
/
alignment_result.hpp
configuration
/
configuration.hpp
pairwise
/
alignment_result.hpp
debug_stream
/
debug_stream_type.hpp
pairwise
/
alignment_result.hpp
detail
/
template_inspection.hpp
pairwise
/
edit_distance_fwd.hpp
detail
/
deferred_crtp_base.hpp
pairwise
/
edit_distance_fwd.hpp
platform.hpp
pairwise
/
edit_distance_unbanded.hpp
configuration
/
configuration.hpp
pairwise
/
policy
/
simd_affine_gap_policy.hpp
configuration
/
configuration.hpp
pairwise
/
policy
/
simd_find_optimum_policy.hpp
detail
/
empty_type.hpp
scoring
/
scoring_scheme_base.hpp
concept
/
cereal.hpp
scoring
/
scoring_scheme_base.hpp
detail
/
strong_type.hpp
seqan3
alignment
Generated on Thu Nov 11 2021 09:23:19 for SeqAn3 by
1.9.2