alignment → utility Relation

File in seqan3/alignment	Includes file in seqan3/utility
aligned_sequence / aligned_sequence_concept.hpp	container / concept.hpp
aligned_sequence / debug_stream_alignment.hpp	tuple / concept.hpp
aligned_sequence / debug_stream_alignment.hpp	views / slice.hpp
aligned_sequence / debug_stream_alignment.hpp	views / zip.hpp
configuration / align_config_output.hpp	concept / exposition_only / core_language.hpp
configuration / align_config_score_type.hpp	concept / exposition_only / core_language.hpp
configuration / align_config_scoring_scheme.hpp	type_traits / basic.hpp
decorator / gap_decorator.hpp	views / type_reduce.hpp
scoring / detail / simd_match_mismatch_scoring_scheme.hpp	detail / bits_of.hpp
scoring / detail / simd_match_mismatch_scoring_scheme.hpp	simd / algorithm.hpp
scoring / detail / simd_match_mismatch_scoring_scheme.hpp	simd / concept.hpp
scoring / detail / simd_matrix_scoring_scheme.hpp	simd / algorithm.hpp
scoring / detail / simd_matrix_scoring_scheme.hpp	simd / concept.hpp
detail / pairwise_alignment_concept.hpp	tuple / concept.hpp
matrix / detail / affine_cell_proxy.hpp	concept / exposition_only / core_language.hpp
matrix / detail / affine_cell_proxy.hpp	simd / concept.hpp
matrix / detail / affine_cell_proxy.hpp	tuple / concept.hpp
matrix / detail / aligned_sequence_builder.hpp	type_traits / concept.hpp
matrix / detail / aligned_sequence_builder.hpp	type_traits / lazy_conditional.hpp
matrix / detail / aligned_sequence_builder.hpp	views / convert.hpp
matrix / detail / aligned_sequence_builder.hpp	views / slice.hpp
matrix / detail / aligned_sequence_builder.hpp	views / type_reduce.hpp
matrix / detail / alignment_matrix_column_major_range_base.hpp	type_traits / basic.hpp
matrix / detail / alignment_optimum.hpp	concept / exposition_only / core_language.hpp
matrix / detail / alignment_optimum.hpp	simd / algorithm.hpp
matrix / detail / alignment_optimum.hpp	simd / concept.hpp
matrix / detail / alignment_optimum.hpp	simd / simd_traits.hpp
matrix / detail / alignment_score_matrix_one_column.hpp	concept / exposition_only / core_language.hpp
matrix / detail / alignment_score_matrix_one_column.hpp	simd / concept.hpp
matrix / detail / alignment_score_matrix_one_column_base.hpp	container / aligned_allocator.hpp
matrix / detail / alignment_score_matrix_one_column_base.hpp	concept / exposition_only / core_language.hpp
matrix / detail / alignment_score_matrix_one_column_base.hpp	simd / concept.hpp
matrix / detail / alignment_score_matrix_proxy.hpp	concept / exposition_only / core_language.hpp
matrix / detail / alignment_score_matrix_proxy.hpp	simd / concept.hpp
matrix / detail / alignment_trace_matrix_base.hpp	container / aligned_allocator.hpp
matrix / detail / alignment_trace_matrix_base.hpp	simd / concept.hpp
matrix / detail / alignment_trace_matrix_full.hpp	views / zip.hpp
matrix / detail / alignment_trace_matrix_full_banded.hpp	views / zip.hpp
matrix / detail / alignment_trace_matrix_proxy.hpp	simd / concept.hpp
matrix / detail / alignment_trace_matrix_proxy.hpp	type_traits / basic.hpp
matrix / detail / combined_score_and_trace_matrix.hpp	concept / exposition_only / core_language.hpp
matrix / detail / combined_score_and_trace_matrix.hpp	views / zip.hpp
matrix / detail / coordinate_matrix.hpp	container / aligned_allocator.hpp
matrix / detail / coordinate_matrix.hpp	simd / algorithm.hpp
matrix / detail / coordinate_matrix.hpp	simd / concept.hpp
matrix / detail / coordinate_matrix.hpp	simd / simd_traits.hpp
matrix / detail / coordinate_matrix.hpp	simd / views / iota_simd.hpp
matrix / detail / coordinate_matrix.hpp	type_traits / lazy_conditional.hpp
matrix / detail / edit_distance_score_matrix_full.hpp	detail / bits_of.hpp
matrix / detail / edit_distance_trace_matrix_full.hpp	detail / bits_of.hpp
matrix / detail / matrix_coordinate.hpp	concept / exposition_only / core_language.hpp
matrix / detail / matrix_coordinate.hpp	simd / algorithm.hpp
matrix / detail / matrix_coordinate.hpp	simd / concept.hpp
matrix / detail / score_matrix_single_column.hpp	concept / exposition_only / core_language.hpp
matrix / detail / score_matrix_single_column.hpp	container / aligned_allocator.hpp
matrix / detail / score_matrix_single_column.hpp	simd / concept.hpp
matrix / detail / score_matrix_single_column.hpp	views / repeat_n.hpp
matrix / detail / score_matrix_single_column.hpp	views / zip.hpp
matrix / detail / trace_matrix_full.hpp	concept / exposition_only / core_language.hpp
matrix / detail / trace_matrix_full.hpp	container / aligned_allocator.hpp
matrix / detail / trace_matrix_full.hpp	views / repeat_n.hpp
matrix / detail / trace_matrix_full.hpp	views / zip.hpp
matrix / detail / two_dimensional_matrix_iterator_base.hpp	type_traits / basic.hpp
pairwise / detail / alignment_algorithm_state.hpp	concept / exposition_only / core_language.hpp
pairwise / detail / alignment_algorithm_state.hpp	simd / concept.hpp
pairwise / detail / concept.hpp	tuple / concept.hpp
pairwise / detail / pairwise_alignment_algorithm.hpp	container / aligned_allocator.hpp
pairwise / detail / pairwise_alignment_algorithm.hpp	detail / type_name_as_string.hpp
pairwise / detail / pairwise_alignment_algorithm.hpp	simd / views / to_simd.hpp
pairwise / detail / pairwise_alignment_algorithm.hpp	views / elements.hpp
pairwise / detail / pairwise_alignment_algorithm_banded.hpp	views / slice.hpp
pairwise / detail / policy_affine_gap_recursion.hpp	simd / algorithm.hpp
pairwise / detail / policy_affine_gap_recursion.hpp	simd / concept.hpp
pairwise / detail / policy_optimum_tracker.hpp	tuple / concept.hpp
pairwise / detail / policy_optimum_tracker_simd.hpp	simd / algorithm.hpp
pairwise / detail / policy_optimum_tracker_simd.hpp	simd / simd.hpp
pairwise / detail / policy_optimum_tracker_simd.hpp	simd / simd_traits.hpp
pairwise / detail / policy_optimum_tracker_simd.hpp	type_traits / lazy_conditional.hpp
pairwise / detail / policy_optimum_tracker_simd.hpp	views / zip.hpp
pairwise / detail / policy_scoring_scheme.hpp	simd / concept.hpp
pairwise / detail / type_traits.hpp	detail / bits_of.hpp
pairwise / detail / type_traits.hpp	simd / simd_traits.hpp
pairwise / detail / type_traits.hpp	simd / simd.hpp
pairwise / detail / type_traits.hpp	type_traits / function_traits.hpp
pairwise / detail / type_traits.hpp	type_traits / lazy_conditional.hpp
pairwise / detail / type_traits.hpp	views / chunk.hpp
pairwise / detail / type_traits.hpp	views / zip.hpp
pairwise / align_result_selector.hpp	type_traits / basic.hpp
pairwise / align_result_selector.hpp	type_traits / detail / transformation_trait_or.hpp
pairwise / align_result_selector.hpp	type_traits / lazy_conditional.hpp
pairwise / alignment_algorithm.hpp	container / aligned_allocator.hpp
pairwise / alignment_algorithm.hpp	simd / concept.hpp
pairwise / alignment_algorithm.hpp	simd / simd.hpp
pairwise / alignment_algorithm.hpp	simd / simd_traits.hpp
pairwise / alignment_algorithm.hpp	simd / views / to_simd.hpp
pairwise / alignment_algorithm.hpp	type_traits / function_traits.hpp
pairwise / alignment_algorithm.hpp	views / elements.hpp
pairwise / alignment_configurator.hpp	simd / simd.hpp
pairwise / alignment_configurator.hpp	tuple / concept.hpp
pairwise / alignment_configurator.hpp	type_traits / lazy_conditional.hpp
pairwise / alignment_configurator.hpp	views / type_reduce.hpp
pairwise / alignment_configurator.hpp	views / zip.hpp
pairwise / edit_distance_fwd.hpp	detail / bits_of.hpp
pairwise / policy / affine_gap_policy.hpp	concept / exposition_only / core_language.hpp
pairwise / policy / alignment_matrix_policy.hpp	type_traits / basic.hpp
pairwise / policy / alignment_matrix_policy.hpp	views / slice.hpp
pairwise / policy / alignment_matrix_policy.hpp	views / zip.hpp
pairwise / policy / scoring_scheme_policy.hpp	simd / concept.hpp
pairwise / policy / scoring_scheme_policy.hpp	type_traits / basic.hpp
pairwise / policy / simd_affine_gap_policy.hpp	concept / exposition_only / core_language.hpp
pairwise / policy / simd_affine_gap_policy.hpp	simd / algorithm.hpp
pairwise / policy / simd_affine_gap_policy.hpp	simd / concept.hpp
pairwise / policy / simd_affine_gap_policy.hpp	simd / simd_traits.hpp
pairwise / policy / simd_find_optimum_policy.hpp	simd / concept.hpp
pairwise / policy / simd_find_optimum_policy.hpp	views / zip.hpp
scoring / scoring_scheme_base.hpp	concept / exposition_only / core_language.hpp