SeqAn3 3.1.0
The Modern C++ library for sequence analysis.
interleave.hpp
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1// -----------------------------------------------------------------------------------------------------
2// Copyright (c) 2006-2021, Knut Reinert & Freie Universität Berlin
3// Copyright (c) 2016-2021, Knut Reinert & MPI für molekulare Genetik
4// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5// shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
6// -----------------------------------------------------------------------------------------------------
7
13#pragma once
14
15#include <cmath>
16#include <seqan3/std/concepts>
17#include <seqan3/std/ranges>
18
26
27namespace seqan3::detail
28{
29
30// ============================================================================
31// view_interleave
32// ============================================================================
33
45template <std::ranges::random_access_range urng_t, std::ranges::random_access_range inserted_rng_t>
47 requires std::ranges::view<urng_t> && std::ranges::sized_range<urng_t> &&
48 std::ranges::view<inserted_rng_t> && std::ranges::sized_range<inserted_rng_t> &&
49 std::common_reference_with<std::ranges::range_reference_t<urng_t>,
50 std::ranges::range_reference_t<inserted_rng_t>>
52class view_interleave : public std::ranges::view_interface<view_interleave<urng_t, inserted_rng_t>>
53{
54private:
56 urng_t urange;
58 size_t step_size{};
60 inserted_rng_t inserted_range;
61
67 using size_type = std::ranges::range_size_t<urng_t>;
69 using reference = ranges::common_reference_t<std::ranges::range_reference_t<urng_t>,
70 std::ranges::range_reference_t<inserted_rng_t>>;
72 using const_reference = detail::transformation_trait_or_t<
73 ranges::common_reference<std::ranges::range_reference_t<urng_t const>,
74 std::ranges::range_reference_t<inserted_rng_t const>>, void>;
76 using value_type = std::ranges::range_value_t<urng_t>;
78 using difference_type = std::ranges::range_difference_t<urng_t>;
80 using iterator = detail::random_access_iterator<view_interleave>;
82 using const_iterator = detail::random_access_iterator<view_interleave const>;
84
86 template <typename parent_type, typename crtp_base>
87 friend class detail::random_access_iterator_base;
88
89public:
93 constexpr view_interleave() noexcept = default;
94 constexpr view_interleave(view_interleave const & rhs) noexcept = default;
95 constexpr view_interleave(view_interleave && rhs) noexcept = default;
96 constexpr view_interleave & operator=(view_interleave const & rhs) noexcept = default;
97 constexpr view_interleave & operator=(view_interleave && rhs) noexcept = default;
98 ~view_interleave() noexcept = default;
99
105 view_interleave(urng_t && _urange, size_t const _step_size, inserted_rng_t && _inserted_range) :
106 urange{_urange}, step_size{_step_size}, inserted_range{_inserted_range}
107 {}
108
118 template <typename orng_t, typename oirng_t>
120 requires std::constructible_from<urng_t, decltype(views::type_reduce(std::declval<orng_t>()))> &&
121 std::constructible_from<inserted_rng_t, decltype(detail::persist(std::declval<oirng_t>()))>
123 view_interleave(orng_t && _urange, size_t const _step_size, oirng_t && _inserted_range) :
124 view_interleave{views::type_reduce(std::forward<orng_t>(_urange)), _step_size,
125 detail::persist(std::forward<oirng_t>(_inserted_range))}
126 {}
128
145 iterator begin() noexcept
146 {
147 return {*this, 0};
148 }
149
151 const_iterator begin() const noexcept
152 {
153 return {*this, 0};
154 }
155
169 iterator end() noexcept
170 {
171 return {*this, size()};
172 }
173
175 const_iterator end() const noexcept
176 {
177 return {*this, size()};
178 }
180
189 size_type size()
190 {
191 return std::ranges::size(urange) +
192 ((std::floor(std::ranges::size(urange) / step_size) -
193 (std::ranges::size(urange) % step_size == 0 ? 1 : 0)) *
194 std::ranges::size(inserted_range));
195 }
196
198 size_type size() const
199 {
200 return std::ranges::size(urange) +
201 ((std::floor(std::ranges::size(urange) / step_size) -
202 (std::ranges::size(urange) % step_size == 0 ? 1 : 0)) *
203 std::ranges::size(inserted_range));
204 }
205
221 reference operator[](size_type const i)
222 {
223 size_t combined_size = step_size + std::ranges::size(inserted_range);
224 assert(i < size());
225 if (i % (combined_size) < step_size)
226 return urange[i - (std::floor(i/(combined_size)) * std::ranges::size(inserted_range))];
227 else
228 return inserted_range[(i % (combined_size)) - step_size];
229 }
230
232 const_reference operator[](size_type const i) const
233 {
234 size_t combined_size = step_size + std::ranges::size(inserted_range);
235 assert(i < size());
236 if (i % (combined_size) < step_size)
237 return urange[i - (std::floor(i/(combined_size)) * std::ranges::size(inserted_range))];
238 else
239 return inserted_range[(i % (combined_size)) - step_size];
240 }
241};
242
245template <std::ranges::random_access_range urng_t, std::ranges::random_access_range inserted_rng_t>
247 requires std::ranges::viewable_range<urng_t> && std::ranges::sized_range<urng_t> &&
248 std::ranges::sized_range<inserted_rng_t> &&
249 std::common_reference_with<std::ranges::range_reference_t<urng_t>,
250 std::ranges::range_reference_t<inserted_rng_t>>
252view_interleave(urng_t &&, size_t, inserted_rng_t &&)
253 -> view_interleave<decltype(views::type_reduce(std::declval<urng_t>())),
254 decltype(detail::persist(std::declval<inserted_rng_t>()))>;
255
256// ============================================================================
257// interleave_fn (adaptor definition)
258// ============================================================================
259
262struct interleave_fn
263{
265 template <std::ranges::forward_range inserted_rng_t, std::integral size_type>
266 constexpr auto operator()(size_type const size, inserted_rng_t && i) const noexcept
267 {
268 return detail::adaptor_from_functor{*this, size, std::forward<inserted_rng_t>(i)};
269 }
270
277 template <std::ranges::range urng_t, std::ranges::range inserted_rng_t, std::integral size_type>
278 constexpr auto operator()(urng_t && urange, size_type const size, inserted_rng_t && i) const noexcept
279 {
280 static_assert(std::ranges::forward_range<urng_t>,
281 "The underlying range parameter in views::interleave must model std::ranges::forward_range.");
282 static_assert(std::ranges::viewable_range<urng_t>,
283 "The underlying range parameter in views::interleave must model std::ranges::viewable_range.");
284 static_assert(std::ranges::forward_range<inserted_rng_t>,
285 "The range to be inserted by views::interleave must model std::ranges::forward_range.");
286 if constexpr (std::ranges::random_access_range<urng_t> && std::ranges::sized_range<urng_t> &&
287 std::ranges::random_access_range<inserted_rng_t> && std::ranges::sized_range<inserted_rng_t>)
288 {
289 return detail::view_interleave{std::forward<urng_t>(urange),
290 static_cast<size_t>(size),
291 std::forward<inserted_rng_t>(i)};
292 }
293 else
294 {
295 return std::forward<urng_t>(urange) | seqan3::views::chunk(static_cast<size_t>(size))
296 | views::join_with(std::forward<inserted_rng_t>(i));
297 }
298 }
299};
300
301} // namespace seqan3::detail
302
303// ============================================================================
304// views::interleave (adaptor instance definition)
305// ============================================================================
306
307namespace seqan3::views
308{
380inline constexpr auto interleave = detail::interleave_fn{};
381
382} // namespace seqan3::views
Provides seqan3::detail::adaptor_from_functor.
T begin(T... args)
Provides seqan3::views::chunk.
The <concepts> header from C++20's standard library.
T end(T... args)
T floor(T... args)
T forward(T... args)
constexpr size_t size
The size of a type pack.
Definition: traits.hpp:151
constexpr auto join_with
A join view, please use std::views::join if you don't need a separator.
Definition: join_with.hpp:29
constexpr auto chunk
A chunk view.
Definition: chunk.hpp:29
constexpr auto type_reduce
A view adaptor that behaves like std::views::all, but type erases certain ranges.
Definition: type_reduce.hpp:153
constexpr auto interleave
A view that interleaves a given range into another range at regular intervals.
Definition: interleave.hpp:380
Provides seqan3::views::join_with.
The SeqAn namespace for views.
Definition: char_to.hpp:22
SeqAn specific customisations in the standard namespace.
Provides seqan3::detail::persist.
Provides the seqan3::detail::random_access_iterator class.
The <ranges> header from C++20's standard library.
Provides seqan3::detail::transformation_trait_or.
Provides seqan3::views::type_reduce.