30struct lower_diagonal :
public seqan3::detail::strong_type<int32_t, lower_diagonal>
33 using base_t = seqan3::detail::strong_type<int32_t, lower_diagonal>;
41struct upper_diagonal :
public seqan3::detail::strong_type<int32_t, upper_diagonal>
44 using base_t = seqan3::detail::strong_type<int32_t, upper_diagonal>;
101 static constexpr seqan3::detail::align_config_id
id{seqan3::detail::align_config_id::band};
Includes customized exception types for the alignment module .
Configuration element for setting a fixed size band.
Definition: align_config_band.hpp:63
constexpr band_fixed_size & operator=(band_fixed_size const &)=default
Defaulted.
constexpr band_fixed_size()=default
Defaulted.
constexpr band_fixed_size(seqan3::align_cfg::lower_diagonal const lower_diagonal, seqan3::align_cfg::upper_diagonal const upper_diagonal)
Initialises the fixed size band by setting the lower and the upper matrix diagonal.
Definition: align_config_band.hpp:92
constexpr band_fixed_size(band_fixed_size const &)=default
Defaulted.
constexpr band_fixed_size & operator=(band_fixed_size &&)=default
Defaulted.
~band_fixed_size()=default
Defaulted.
constexpr band_fixed_size(band_fixed_size &&)=default
Defaulted.
Provides seqan3::detail::empty_type.
A special sub namespace for the alignment configurations.
Definition: align_config_band.hpp:25
constexpr auto const & get(configuration< configs_t... > const &config) noexcept
This is an overloaded member function, provided for convenience. It differs from the above function o...
Definition: configuration.hpp:415
Provides seqan3::pipeable_config_element.
Provides basic data structure for strong types.
A strong type representing the lower diagonal of the seqan3::align_cfg::band_fixed_size.
Definition: align_config_band.hpp:31
seqan3::detail::strong_type< int32_t, lower_diagonal > base_t
The type of the strong type base class.
Definition: align_config_band.hpp:33
A strong type representing the upper diagonal of the seqan3::align_cfg::band_fixed_size.
Definition: align_config_band.hpp:42
seqan3::detail::strong_type< int32_t, upper_diagonal > base_t
The type of the strong type base class.
Definition: align_config_band.hpp:44
Adds pipe interface to configuration elements.
Definition: pipeable_config_element.hpp:32