SeqAn3 3.2.0
The Modern C++ library for sequence analysis.
concept.hpp
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1// -----------------------------------------------------------------------------------------------------
2// Copyright (c) 2006-2022, Knut Reinert & Freie Universität Berlin
3// Copyright (c) 2016-2022, Knut Reinert & MPI für molekulare Genetik
4// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5// shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
6// -----------------------------------------------------------------------------------------------------
7
13#pragma once
14
15#include <ranges>
16#include <tuple>
17
20
21namespace seqan3::detail
22{
23
37template <typename t>
38concept sequence_pair = requires () {
39 requires tuple_like<t>;
40 requires std::tuple_size_v<t> == 2;
41 requires std::ranges::forward_range<std::tuple_element_t<0, t>>;
42 requires std::ranges::forward_range<std::tuple_element_t<1, t>>;
45 };
47
60template <typename t>
61concept sequence_pair_range = std::ranges::forward_range<t> && sequence_pair<std::ranges::range_value_t<t>>;
63
82template <typename t>
83concept indexed_sequence_pair_range =
84 std::ranges::forward_range<t> && requires (std::ranges::range_value_t<t> value) {
85 requires tuple_like<decltype(value)>;
86 requires std::tuple_size_v<decltype(value)> == 2;
87 requires sequence_pair<std::tuple_element_t<0, decltype(value)>>;
88 requires std::copy_constructible<std::tuple_element_t<1, decltype(value)>>;
89 };
91
106template <typename t>
107concept align_pairwise_single_input =
108 sequence_pair<std::remove_reference_t<t>> && std::is_lvalue_reference_v<t>
109 || (std::ranges::viewable_range<std::tuple_element_t<0, std::remove_reference_t<t>>>
110 && std::ranges::viewable_range<std::tuple_element_t<1, std::remove_reference_t<t>>>);
112
131template <typename t>
132concept align_pairwise_range_input =
133 std::ranges::forward_range<t> && sequence_pair<std::ranges::range_value_t<t>>
134 && ((std::ranges::viewable_range<t> && std::is_lvalue_reference_v<std::ranges::range_reference_t<t>>)
135 || align_pairwise_single_input<std::remove_reference_t<std::ranges::range_reference_t<t>>>);
137} // namespace seqan3::detail
Core alphabet concept and free function/type trait wrappers.
The basis for seqan3::alphabet, but requires only rank interface (not char).
Whether a type behaves like a tuple.
T tuple_size_v
Provides seqan3::tuple_like.