SeqAn3 3.2.0
The Modern C++ library for sequence analysis.
mask.hpp
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1// -----------------------------------------------------------------------------------------------------
2// Copyright (c) 2006-2022, Knut Reinert & Freie Universität Berlin
3// Copyright (c) 2016-2022, Knut Reinert & MPI für molekulare Genetik
4// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5// shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
6// -----------------------------------------------------------------------------------------------------
7
13#pragma once
14
15#include <cassert>
16
18
19namespace seqan3
20{
37class mask : public alphabet_base<mask, 2, void>
38{
39private:
42
44 friend base_t;
45
46public:
50 constexpr mask() = default;
51 constexpr mask(mask const &) = default;
52 constexpr mask(mask &&) = default;
53 constexpr mask & operator=(mask const &) = default;
54 constexpr mask & operator=(mask &&) = default;
55 ~mask() = default;
56
58
64
68 static const mask unmasked;
69
74 static const mask masked;
76};
77
78constexpr mask mask::unmasked{mask{}.assign_rank(0)};
79constexpr mask mask::masked{mask{}.assign_rank(1)};
80} // namespace seqan3
Provides seqan3::alphabet_base.
A CRTP-base that makes defining a custom alphabet easier.
Definition: alphabet_base.hpp:57
constexpr derived_type & assign_rank(rank_type const c) noexcept
Assign from a numeric value.
Definition: alphabet_base.hpp:187
Implementation of a masked alphabet to be used for tuple composites..
Definition: mask.hpp:38
static const mask masked
Member for masked.
Definition: mask.hpp:74
constexpr mask & operator=(mask const &)=default
Defaulted.
constexpr mask(mask &&)=default
Defaulted.
constexpr mask(mask const &)=default
Defaulted.
constexpr mask()=default
Defaulted.
~mask()=default
Defaulted.
static const mask unmasked
Member for unmasked.
Definition: mask.hpp:68
constexpr mask & operator=(mask &&)=default
Defaulted.
The main SeqAn3 namespace.
Definition: aligned_sequence_concept.hpp:29