search.hpp File Reference

Provides the public interface for search algorithms. More...

#include <algorithm>
#include <ranges>
#include <seqan3/core/algorithm/algorithm_result_generator_range.hpp>
#include <seqan3/core/algorithm/detail/algorithm_executor_blocking.hpp>
#include <seqan3/core/configuration/configuration.hpp>
#include <seqan3/core/detail/persist_view.hpp>
#include <seqan3/search/configuration/default_configuration.hpp>
#include <seqan3/search/configuration/on_result.hpp>
#include <seqan3/search/configuration/parallel.hpp>
#include <seqan3/search/detail/search_configurator.hpp>
#include <seqan3/search/detail/search_traits.hpp>
#include <seqan3/utility/views/convert.hpp>
#include <seqan3/utility/views/deep.hpp>
#include <seqan3/utility/views/zip.hpp>

Include dependency graph for search.hpp:

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Namespaces
namespace	seqan3
	The main SeqAn3 namespace.

Functions
template<typename index_t , std::ranges::forward_range queries_t, typename configuration_t = decltype(search_cfg::default_configuration)> requires std::ranges::forward_range<std::ranges::range_reference_t<queries_t>> && std::same_as<range_innermost_value_t<queries_t>, typename index_t::alphabet_type>
auto	seqan3::search (queries_t &&queries, index_t const &index, configuration_t const &cfg=search_cfg::default_configuration)
	Search a query or a range of queries in an index. More...

Detailed Description

Provides the public interface for search algorithms.

Author

Christopher Pockrandt <christopher.pockrandt AT fu-berlin.de>