SeqAn3 3.2.0
The Modern C++ library for sequence analysis.
input_options.hpp
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1// -----------------------------------------------------------------------------------------------------
2// Copyright (c) 2006-2022, Knut Reinert & Freie Universität Berlin
3// Copyright (c) 2016-2022, Knut Reinert & MPI für molekulare Genetik
4// This file may be used, modified and/or redistributed under the terms of the 3-clause BSD-License
5// shipped with this file and also available at: https://github.com/seqan/seqan3/blob/master/LICENSE.md
6// -----------------------------------------------------------------------------------------------------
7
13#pragma once
14
16
17namespace seqan3
18{
25template <typename sequence_legal_alphabet>
27{
29 bool truncate_ids = false;
34};
35
36} // namespace seqan3
The main SeqAn3 namespace.
Definition: aligned_sequence_concept.hpp:29
Provides platform and dependency checks.
The options type defines various option members that influence the behaviour of all or some formats.
Definition: input_options.hpp:27
bool fasta_ignore_blanks_before_id
Remove spaces after ">" (or ";") before the actual ID.
Definition: input_options.hpp:33
bool embl_genbank_complete_header
Read the complete_header into the seqan3::field::id for embl or genbank format.
Definition: input_options.hpp:31
bool truncate_ids
Read the ID string only up until the first whitespace character.
Definition: input_options.hpp:29