assignQualId

Function

assignQualId

Extracts the quality value id of a sequence file fragment.

assignQualId(id, seqFragment, formatTag)

Include Headers

seqan/file.h

Parameters

id	The resulting quality value id of a sequence (e.g. Fastq Quality Id). Types: CharString
seqFragment	A sequence file fragment. Types: String
formatTag	A file format tag. Types: AutoSeqFormat, File Format

Remarks

After calling split on a ConcatDirect StringSet to divide a file into fragments, this function can be used to extract the quality value id of every fragment in the StringSet.