Function
createCountArray
Builds an index on a StringSet storing how often a q-gram occurs in each sequence.
Include Headers
seqan/index.h
Parameters
The resulting list of pairs (seqNo,count). | |
The resulting array that indicates at which position in the count table the corresponding a certain q-gram can be found. | |
Stores the q-gram hashes for the openaddressing hash maps, see indexBucketMap.
If bucketMap is of the type Nothing the q-gram hash determines the bucket address in the index. | |
The StringSet. Types: StringSet | |
The shape to be used. Types: Shape | |
Store every |
Remarks
This function should not be called directly. Please use indexCreate or indexRequire.
The resulting tables must have appropriate size before calling this function.
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