Extends a seed and increases the score.
The seed to extend.
A reference to the score of the seed. This will be increased by the score of the extension.
The query sequence.
The database sequence.
Defines the direction in which the seed should be extended. 0 = left, 1 = right, 2 = both
The score drop after which the extension should stop. The extension stops if this value is exceeded.
The scoring scheme.
Types: Simple Score
The algorithm to use.
SeqAn - Sequence Analysis Library - www.seqan.de