Extension of seeds with score calculation.
The container with the Seed objects to extend.
A container with the scores of the seeds. The scores will be increased by the score of the extension. It can be omitted if the seeds container is a SeedSet with scores.
Iterator pointing to the first seeds score. The scores will be increased by the score of the extension.
Iterator pointing to the first value to add.
Iterator pointing just behind the last value to add.
The query sequence.
The database sequence.
Defines the direction in which the seed should be extended. 0 = left, 1 = right, 2 = both
The score drop after which the extension should stop. The extension stops if this value is exceeded.
The scoring sheme.
Types: Simple Score
The algorithm to use.
SeqAn - Sequence Analysis Library - www.seqan.de