Function
sumOfPairsScore
Given a multiple alignment, this function calculates the sum-of-pairs score.
Include Headers
seqan/graph_msa.h
Parameters
An alignment graph. Types: Alignment Graph | |
A score object. Types: Score |
Remarks
This function does NOT assume independent columns.
That is, gap openings are properly scored.
If you want the fast version assuming independ columns use sumOfPairsScoreInd.
Return Values
void
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