Function
convertAlignment
Converts an alignment graph into an alignment matrix.
Include Headers
seqan/graph_align.h
Parameters
Alignment graph to convert. In-parameter: An alignment graph. Types: Alignment Graph | |
Vertex to component mapping. | |
The order of the component graph when sorting topologically. | |
Component sizes. | |
Out-parameter: A string that represents an alignment matrix. |
Remarks
The variant with component and order computes a topological sorting of connected components.
Return Values
A bool that is true iff the alignment graph is a valid alignment
Member of
SeqAn - Sequence Analysis Library - www.seqan.de