Class AlignQualityStoreElement
Stores the alignment qualities.

Defined in <seqan/store.h>
Signature template <typename TScore[, typename TSpec]> struct AlignQualityStoreElement;

Template Parameters

TScore Type to store align and pair score values.
TSpec The specializing type. Default: void.

Member Function Overview

Member Variable Overview

Detailed Description

Value type of alignQualityStore string.

Member Functions Detail


Constructor, sets all members to 0.

Member Variables Detail

TCount AlignQualityStoreElement::errors

Absolute number of errors in the alignment (unsigned char).

TScore AlignQualityStoreElement::pairScore

Combined score of both alignmetns and pair match.

TScore AlignQualityStoreElement::score

Score of the alignment.