Class JoinConfig
Specifies the strategy and all necessary parameters used to journal a sequence to a reference sequence.

All Subcl's GlobalAlign, GlobalChain
Defined in <seqan/journaled_set.h>
Signature template <[typename TMethod]> struct JoinConfig;

Template Parameters

TMethod The method type. Types: GlobalAlign, GlobalChain

Detailed Description

SeqAn offers two general methods to compute the journal. The first one uses a globalAlignment function and the second one uses an anchor based approach.