Class SwiftParameters
Parameters for the SWIFT algorithm.

Defined in <seqan/index.h>
Signature struct SwiftParameters;

Member Function Overview

Member Variable Overview

See Also

Member Functions Detail


Default constructor.

Initializes all member variables, default values are given in the variable documentation.

Member Variables Detail

bool SwiftParameters::debug

Whether to print debug information, defaults to false.

int SwiftParameters::minLog2Delta

Minimal delta to use, defaults to 16.

int SwiftParameters::minThreshold

Minimal threshold to use initially, defaults to 1.

bool SwiftParameters::printDots

Whether to print dots for the scanning progress, defaults to false.

int SwiftParameters::tabooLength

Taboo length to use, defaults to 1.