fn() assignQual
Extracts the quality values of a sequence file fragment.

Defined in <seqan/file.h>
Signature void assignQual(qualities, seqFragment, formatTag);


qualities The result quality values encoded in ASCII. The quality values are in encoded in ASCII and must be manually converted into zero-based values. Type: String.
seqFragment A sequence file fragment. Type: SequenceConcept.
formatTag A file format tag. Type: FileFormatTag.

Detailed Description


After calling split on a ConcatDirectStringSet to divide a file into fragments, this function can be used to extrac the sequence quality values of every fragment in the StringSet.