Group Join Strategies Tags
Tags used for selecting journaling strategies when joining a JournaledString to a global reference sequence.

Grouped Tags Overview

Grouped Tags Detail

typedef Tag<JournaledCompact_> JournaledCompact;

Defined in
Computes an optimal alignment to construct a JournaledString.

This strategy is slow but depending on the scoring function minimizes the memory requirements for the computed JournaledSet.

typedef Tag<JournaledManhattan_> JournaledManhattan.

Defined in
Constructs a JournaledString based on Manhattan distance.

This strategy is very fast on the cost of memory.