Spec GlobalAlign
Selects a global alignment method to join a JournaledString to a global reference sequence.

Extends JoinConfig
All Extended JoinConfig
Defined in <seqan/journaled_set.h>
Signature template <[typename TStrategy]> struct GlobalAlign;

Template Parameters

TStrategy The strategy used to compute the journal (can be one of JournaledCompact and JournaledManhattan, defaults to JournaledManhattan).

Detailed Description

If JournaledManhattan is selected, then the resulting JournaledString consists of one insertion node covering the complete joined sequence.