Spec
GlobalChainSelects an anchor-based method to join a JournaledString to a global reference sequence.
Selects an anchor-based method to join a JournaledString to a global reference sequence.
Extends | JoinConfig |
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All Extended | JoinConfig |
Defined in | <seqan/journaled_set.h> |
Signature |
template <[typename TStrategy]>
struct GlobalChain;
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Template Parameters
TStrategy |
The strategy used to compute the journal (can be one of JournaledCompact and JournaledManhattan, defaults to JournaledManhattan). |
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Detailed Description
The JournaledManhattan strategy fills the gaps between the anchors with a single insertion node whil the corresponding part of the reference sequence is deleted.