Class
AlignColsPseudo columns container for row-based Align class.
Pseudo columns container for row-based Align class.
Implements | EqualityComparableConcept, RandomAccessContainerConcept |
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All Impl'd | AssignableConcept, ContainerConcept, DestructibleConcept, EqualityComparableConcept, ForwardContainerConcept, RandomAccessContainerConcept, ReversibleContainerConcept |
Defined in | <seqan/align.h> |
Signature |
template <typename TAlign>
class AlignCols<TAlign>;
|
Template Parameters
TAlign |
The Align type. |
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Member Function Overview
Member Functions Inherited From AssignableConcept
Member Functions Inherited From EqualityComparableConcept
Member Functions Inherited From RandomAccessContainerConcept
Interface Function Overview
-
TIterator iter(cols, pos[, tag]);
Iterator to the item at the given position in the alignment columns. -
TColumn value(alignCols, pos);
Returns AlignCols value at a position.
Interface Functions Inherited From AssignableConcept
Interface Functions Inherited From ContainerConcept
writeValue
write
begin
end
length
empty
swap
getObjectId
moveValue
append
appendValue
shrinkToFit
directionIterator
Interface Functions Inherited From RandomAccessContainerConcept
Interface Metafunction Overview
Interface Metafunctions Inherited From ContainerConcept
Interface Functions Detail
TIterator iter(cols, pos[, tag]);
Iterator to the item at the given position in the alignment columns.
Parameters
cols
|
The AlignCols object to get the iterator for. |
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pos
|
The position to get the iterator for. |
tag
|
The tag to pick the type of the iterator. |
Returns
TIterator |
The resulting iterator. If TTag is the type of tag and TAlignCols the type of cols then TIterator is of the type Iterator<TAlignCols, TTag>::Type. |
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Remarks
If pos is out of range then the iterator is invalid.
Data Races
Thread safety unknown!
TColumn value(alignCols, pos);
Returns AlignCols value at a position.
Returns
TColumn |
The column, as determined by Value metafunction. |
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Data Races
Thread safety unknown!